Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00533 ATGGGTGTTTTCAGTACAGAAAGTGAGTTTGTTTCCTCTATTTCTGCTGAAACATTATTCAAAGCCATTGCTGAAGATAGTATTGATATATTCCCCAAAGCTTTACCAAGCTTATTTGAGAGTGCTGAAATCATTGAAGGAGATGGAGGTCCTGGAACCATTAAAAAGCTTAATATTATCGGAGGTTTAGGGAGTGTGAAGAACCGGGTAGATGCGATTGACAAAGCAAACTATGTGTACAATTATAGTATAAATGAAGGTATTGCTTTGTCAGATCAACCTCTAGAGAAGATATCTTTTGAGTACAAATTGGTGCCAAATCCTGATGGAGGATGCATTGTGAAGTCAACAATCAAATATTATACCAAAGGTGATGCTCAACTTTCTCAACAATATTTGGATGATGGAAATGAGAGATGCAATAGTTTCACCAAGGCTGTTGTGGATTACCTTCAACAAAATCCTAATTACaactaa 477 0.3606 MGVFSTESEFVSSISAETLFKAIAEDSIDIFPKALPSLFESAEIIEGDGGPGTIKKLNIIGGLGSVKNRVDAIDKANYVYNYSINEGIALSDQPLEKISFEYKLVPNPDGGCIVKSTIKYYTKGDAQLSQQYLDDGNERCNSFTKAVVDYLQQNPNYN 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00533 158 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Car07g00533 158 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Car07g00533 158 PRINTS Major pollen allergen Bet V1 signature 64 83 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Car07g00533 158 PRINTS Major pollen allergen Bet V1 signature 83 96 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Car07g00533 158 PRINTS Major pollen allergen Bet V1 signature 109 125 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Car07g00533 158 PRINTS Major pollen allergen Bet V1 signature 143 153 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Car07g00533 158 SUPERFAMILY Bet v1-like 2 156 - -
Car07g00533 158 PANTHER - 1 158 - -
Car07g00533 158 CDD Bet_v1-like 7 151 - -
Car07g00533 158 Gene3D - 1 158 IPR023393 -
Car07g00533 158 Pfam Pathogenesis-related protein Bet v 1 family 1 152 IPR000916 GO:0006952
Car07g00533 158 PANTHER NODULIN-13 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00533 Car-Chr7 4722787 4724466 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00533 - - gmx:100306363 202.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00533 07 4722787 4724466 Car07g00533 07 4722787 4724466 ECH
Car01g00971 01 9091687 9093157 Car07g00533 07 4722787 4724466 PCT