Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00472 ATGGTGTTGGCTTCACCAAAACCAATTAGGAGTGAAAGGATTTTACAAAGTGATGTTATTCCAATAGTGGACCTTAAAGGTGAAAGGTGTGAGGTAATAAAACAAATTGTGAAAGCAAGTGAAGAGTATGGTTTTTTCAAGGTGATAAATCATGGTATAAATGATGAAATTATAGACAAAATGGAAGAGGCAGGGTTTAGTTTCTTTGCAAAACCAATGAGTCAAAAGAAACAAGCTTCACCTGCCTATGGTTGTAATAACATAGGATTTAATGGTGACATTGGTGAGGTTGAGTACCTTCTTCTCAATGCTAACACTTCCTCCATTGCTCAGATATCCAAAACTATATCCATTGATGATCCACATTCAAACTTTAGGTATAAGGTGAGTTCATACACAGAAGCAGTGAAAGAGTTGGCATGTGAGATATTAGAGTTAATGGCAGAGGGTTTGGGGGTCCCTGATACAAAGGTATTCAGCAGTTTGATAAGAGATATTGATAGTGACTCAGTTCTTAGGCTCAATCACTATCCACCTACACTTACTGTTAAGGACAACAATTCTACCTCTAATAATAAAGTTGGTTTTGGAGAGCATTCTGACCCTCAGATCTTGACCATTCTTAGATCTAATGACGTTCCTGGTCTTCAAATCTCTCCTCAACATGGTCTCTGGATCCCTGTCAACCCTGACCCCTCTGCTTTCTGTCTTAATGTTGGTGATGTCCTTGAGGTTATGACAAATGGAAGATTTGTAAGCGTGAGACATAGGGCAATGACAAACTCATACAAATCTAGAATGTCAATGGCATATTTTGGGGCTCCACCTCTAAATGCATGCATTGTTGCTCCACCAATTTTGGTTACACCTCATAGGCCCTCTCTCTTCCGACCATTTAGTTGGGCCGACTACAAAAAAGCCACATATTCACTAAGGCTTGGTGACACAAGAATTCAACTTTTTAGAGCAAACATCTCATGA 981 0.3925 MVLASPKPIRSERILQSDVIPIVDLKGERCEVIKQIVKASEEYGFFKVINHGINDEIIDKMEEAGFSFFAKPMSQKKQASPAYGCNNIGFNGDIGEVEYLLLNANTSSIAQISKTISIDDPHSNFRYKVSSYTEAVKELACEILELMAEGLGVPDTKVFSSLIRDIDSDSVLRLNHYPPTLTVKDNNSTSNNKVGFGEHSDPQILTILRSNDVPGLQISPQHGLWIPVNPDPSAFCLNVGDVLEVMTNGRFVSVRHRAMTNSYKSRMSMAYFGAPPLNACIVAPPILVTPHRPSLFRPFSWADYKKATYSLRLGDTRIQLFRANIS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00472 326 PRINTS Isopenicillin N synthase signature 36 53 - -
Car07g00472 326 PRINTS Isopenicillin N synthase signature 199 220 - -
Car07g00472 326 PRINTS Isopenicillin N synthase signature 235 261 - -
Car07g00472 326 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 323 - -
Car07g00472 326 Gene3D - 4 312 IPR027443 -
Car07g00472 326 Pfam non-haem dioxygenase in morphine synthesis N-terminal 20 79 IPR026992 -
Car07g00472 326 Pfam 2OG-Fe(II) oxygenase superfamily 169 273 IPR044861 -
Car07g00472 326 PANTHER PLANT GIBBERELLIN 2-OXIDASE 3 323 - -
Car07g00472 326 SUPERFAMILY Clavaminate synthase-like 17 315 - -
Car07g00472 326 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 167 275 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00472 Car-Chr7 4205856 4209835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00472 20 322 Glycosyltransferase AT5G59530 26.852 8.49e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00472 K04125 - gmx:100783917 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00472 07 4205856 4209835 Car07g00472 07 4205856 4209835 ECH
Car07g00472 07 4205856 4209835 Car01g00909 01 8296190 8307476 PCT