Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00909 ATGGTGGTGGCTTCCCCAAATTCGATGTTAGGGGAAAAGATTCTACCTATTGACCTACCAATGATAGACCTATCATCTGAAAAATCAATGGTAATGAAACTCATTGTGAAAGCTTGTGAAGAATATGGTTTTTTCAATGTTATTAACCATGGTGTCCCTCATGACATCATATCCAAAATGGAAAAAGAAGGTTTTGATTTCTTTGCTAAACCAATGGAAGAAAAGAAATTAGTTGCACTTGATAATCCTTTTGGTTATGGATGCAAGAACATAGGATTCAATGGAGACATGGGTGAAGTGGAATACCTTCTTCTCAATGCCAATGTTCCTTCAATTCCTAATGATCCATCCAATTTCAGCTCCACTGTGAGTGCATACACAAAAGGTGTGAAGGAGCTGGCATGTAAGATATTGGAGCTAATAGCAGAGGGATTGGGGGTCCATGATACATCCATTTTCAGCAGATTTATCAGACATGTTCACAATGACTCACTCCTTAGGCTCAATCACTACCCTCCTATTCCTCCTATACTTAGTAATAGAGTTGGCTTTGGAGAGCATTCTGACCCTCAGATTATTACTATACTCAGATCTAATGATGTTGCTGGACTTCAAATTTCTCTTCAAGATGGTATGTGGAACCCAGTTACTCCTCACCCATCTGCTTTTTGTGTTAATGTGGGTGATCTTCTTCAGGTTATGACAAATGAAAGATTTGTGAGCGTGAGACATAGGGCAGTGACGAACTCAAACAAGTGTAGAATGTCGGTAGCATATTTTGGGGGTCCACCACTTAATGCATGCATTGTTGCTCCCTCAGTTATGGTTACACCAAACAGGCCTTCCCTTCTCTTCAAACCATTCACTTGGGATGAATATAAGAAACTCACCTACTCTCTAAGGCTTGGAGACAACCGCATTGACTTTTTCAGACAACTACAATAA 945 0.3989 MVVASPNSMLGEKILPIDLPMIDLSSEKSMVMKLIVKACEEYGFFNVINHGVPHDIISKMEKEGFDFFAKPMEEKKLVALDNPFGYGCKNIGFNGDMGEVEYLLLNANVPSIPNDPSNFSSTVSAYTKGVKELACKILELIAEGLGVHDTSIFSRFIRHVHNDSLLRLNHYPPIPPILSNRVGFGEHSDPQIITILRSNDVAGLQISLQDGMWNPVTPHPSAFCVNVGDLLQVMTNERFVSVRHRAVTNSNKCRMSVAYFGGPPLNACIVAPSVMVTPNRPSLLFKPFTWDEYKKLTYSLRLGDNRIDFFRQLQ 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00909 314 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 161 263 IPR005123 -
Car01g00909 314 Pfam 2OG-Fe(II) oxygenase superfamily 163 261 IPR044861 -
Car01g00909 314 Pfam non-haem dioxygenase in morphine synthesis N-terminal 19 82 IPR026992 -
Car01g00909 314 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 311 - -
Car01g00909 314 SUPERFAMILY Clavaminate synthase-like 16 305 - -
Car01g00909 314 PANTHER PLANT GIBBERELLIN 2-OXIDASE 3 311 - -
Car01g00909 314 Gene3D - 5 300 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00909 Car-Chr1 8296190 8307476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00909 17 260 Glycosyltransferase AT5G59530 31.679 1.79e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00909 K04125 - gmx:100811043 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00909 01 8296190 8307476 Car01g00909 01 8296190 8307476 ECH
Car07g00472 07 4205856 4209835 Car01g00909 01 8296190 8307476 PCT