Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00433 ATGCCATCTTTATATTATTTAATTACTTTAATATTTTGGTGGACTCAATTCTCATCACCGTTCACATCACATTATTGCTTTTTGTTCATCACCGTTCTTCTAATCCAACAACCTTTTCTGATTTCAAACGCTTTCATGGAGGAAGTTAACGtggtagaaaccaaggatggaaccgtttcagtagctactgcttttgctggtcatcaggaagCTGTGCAAGATAGAGACCACAAATTTTTAAGAAAAGCAGTTGAAGAAGCATATAAAGGGGTGGATTGTGGTGATGGAGGCCCTTTTGGTGCTGTTATTGTTCACAATGATGAAGTAGTTGCTAGTTGTCACAACATGGTTCTGAATTACACTGATCCAACTGCTCATGCTGAGGTCACAGCAATAAGAGAGGCTTGTAAGAAGCTGAAGCAGATAGAACTTTCAGATTGTGAAATATATGCTTCTTGTGAACCTTGCCCCATGTGCTTTGGTGCAATCCACCTTTCCCGAATTAAGAGATTGGTTTATGGAGCGAAGGCTGAGGCAGCAATTGCTATTGGGTTCGATGATTTTATTGCGGATGCATTGCGAGGTACCGGATTCTATCAGAAAGCACAGCTGGAGATTAAAAGAGCTGATGGGAATGAGGCCCTTATTGCAGAAGAGGTTTTTCAGAAAACAAAGGAAAAGTTCCAAATGTATTAG 696 0.3635 MPSLYYLITLIFWWTQFSSPFTSHYCFLFITVLLIQQPFLISNAFMEEVNVVETKDGTVSVATAFAGHQEAVQDRDHKFLRKAVEEAYKGVDCGDGGPFGAVIVHNDEVVASCHNMVLNYTDPTAHAEVTAIREACKKLKQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKAQLEIKRADGNEALIAEEVFQKTKEKFQMY 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00433 231 SUPERFAMILY Cytidine deaminase-like 69 189 IPR016193 GO:0003824
Car07g00433 231 CDD nucleoside_deaminase 80 187 - -
Car07g00433 231 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 126 163 IPR016192 GO:0008270|GO:0016787
Car07g00433 231 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 75 174 IPR002125 -
Car07g00433 231 Gene3D Cytidine Deaminase, domain 2 75 231 - -
Car07g00433 231 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 46 230 - -
Car07g00433 231 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 74 188 IPR002125 -
Car07g00433 231 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 46 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00433 Car-Chr7 3828454 3831850 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00433 - - cam:101506670 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00433 07 3828454 3831850 Car01g01333 01 18616518 18620228 PCT