Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01333 ATGATTCGAACTGGACCGAGGACGATGGAGCTAGCTCTAGTAAGTATGGTGCAAACTAAGGATGGAACTGTTGCAGTAGCTTCTGCTTTTGCTGGCCATAAGGAAGCTATAAAGAACAGAGATCACAAATTTTTAAGAAAAGCAGTTGAAGAAGCATACAAAGGGGTAGAATGTGAAGATGGAGGTCCTTTTGGAGCTGTTATTGTTTGTAATGATGAAGTAATTGCTAGTTGTCACAATATGGTTTTGAGGAACACAGACCCAACTGCTCATGCTGAAGTCACAGCAATAAGAGAGGCTTGTAAGAAACTGAAGCAGATAGAACTTTCAGATTGTGAAATATATACTTCTTGCGAGCCATGCCCAATGTGCTTTGGTGCTATCCACCTTTCTAGAGTTAAGAGGTTGGTTTATGGAGCAAAAGCTGAGGCAGCAATTGCAATTGGTTTCGATGATTTTATTGCTGATGCATTGAGAGGTACTGGATTTTACCAAAAAGCCCAATTGGAAATTAAAAGAGCTGATGGCAATGAGGCCATTATTGCTGAAGAAGTCTTTGAGAAAACAAAGGAAAAATTTCGAATGTATTAA 591 0.3942 MIRTGPRTMELALVSMVQTKDGTVAVASAFAGHKEAIKNRDHKFLRKAVEEAYKGVECEDGGPFGAVIVCNDEVIASCHNMVLRNTDPTAHAEVTAIREACKKLKQIELSDCEIYTSCEPCPMCFGAIHLSRVKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKAQLEIKRADGNEAIIAEEVFEKTKEKFRMY 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01333 196 Gene3D Cytidine Deaminase, domain 2 32 195 - -
Car01g01333 196 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 91 128 IPR016192 GO:0008270|GO:0016787
Car01g01333 196 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 14 195 - -
Car01g01333 196 CDD nucleoside_deaminase 45 152 - -
Car01g01333 196 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 40 139 IPR002125 -
Car01g01333 196 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 39 153 IPR002125 -
Car01g01333 196 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 14 195 - -
Car01g01333 196 SUPERFAMILY Cytidine deaminase-like 35 154 IPR016193 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01333 Car-Chr1 18616518 18620228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01333 - - gmx:100500436 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00433 07 3828454 3831850 Car01g01333 01 18616518 18620228 PCT