Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00355 ATGTTGCCGAAAATTGAAGAAGAGCATAACACGTTGTTACAAGATGTTGAAACTATTAGAAAAACTCTCTACATGGAAAGAACCCTTTCTAGGAATtcaacatcatcatcatcatcatcatcaAAATTCACAGACAAAGATCCTAAACCAAACCCTAATAATAAAGAAGATAATTTGAAAAAGGATAAGAAATCTATATGGAATTGGAATCTATTAAGAGCACTTTCCCTAACAAGGAGTAAGAAATTCAATTGTTGTTTTTCTCTCCAAATCCATTTGATTGAAGGTTTACCTTTGAGTTTCAATGATTCTACCCTTTGTGTTCATTGGAAGAGGCGCGACGAGCATTTGGTGACTCCTCCTGCTAAAGTAATTAAAGGTTCTGCTGAATTTCAAGACATTTTGAGTTACACGTGTTCAATTACTGGAAGTAAAAGTGGACCGCACAATTCTGCAAAATATGAAGGTAAACATTTTTTGCTCTATGCTTCTGTGGTTGGTGTTCCTGAACTTGATTTAGGGAAGCATCGTTTGGATATCACAAGGTTGCTTCCTCTTGCTTTGGAAGATCTTGAAGAGGAGAAGAGTTCAGGGAAATGGACTACAAGTTTTAGGTTATCAGGAAAGGCTAAAGGTGCTGTGATGAATGTAAGTTTTGGGTATGTAGTGGTTGGTGATAACAACATTTGTGCTCCTTATGTATTGACTTCAAGGCAAAATTGTATAGCTTTGAGTGAAACCGATATAAATCCGTGTCAGTATTCGCCTCGGTTTATAGATGAGGTGAAGGATCTTCATGAGGTATTGATGTCATCAAAATCAGTAATGGAAAGTTCAGCAGATGTCTTGTATAAGAAAATTGATGATGAAAACACATGTGGTCCCCTGCACATGAAACATGAACTTGTATTAAAAGAGAATCTTGAGCCAATCAAACTTGATGCATGTCGTTCGCCTGATACTGAAATAGGAAAGCTAGTAGAACATCAGTGTAATGAAAGAAAAACATGTAGTCCAGTGTGTGGCGAATCTGAATTTGATGTGTTTCAAGAAAGCTTGGAGACATTTGAGACAGATGGTTATTCTTTATCTGAGTCTGTAAATGAGAATTCTGATGATTTTTCTGTTGTTGATCAAGGCATTGAATTCAATGTCAGTGATAGTTCTAAGGAAAGTGTCGTGGTACATGAAATTTCTAACAAAAGCGATGAGTTATGGACGAAAGAAATTCTCCTGCAAGAAATAGAATCAGCATTGAATAGTATCTCAGAGTTGGAGACAATAGCATTGGAATCTCCCAAAATTATGGAAGTCACATCTGAGTGTAAGTTCAGAAAGTCACAGAGCTTGGATGATTTCACTGAATCAGTTGCCAGTGAATTTTTGAGTATGCTAGGCGTAGACCATAGTCCAACGGGCTTTAGTTCTGAAAGTGATCCCGAGTCTCCAAGAGAGTGCCTTTTAAGACAATTTGAGAAGGATGTTGGGTCTGAATGTTTCTCTTTATTTAATGTGGATTATgatgaagaagaagaagaagaTTGTGTTTATGATGCTTCTGAGCAGTGTAAGTTCTCTACTGGTATTAGAGCACCATCCTTGTTGCATGATCTGCAGGAAGGGCTTGAATTTGAAAATGTGAGGAGCAAACCAAAGGGTCACATACTAGAAGACTCAGAAACAGAAGCCTTAATGCGTGAATGGGGTTGGAGTGAGGAGTCTTTTCAGCATTCTCCACCAAAAGGCGTTGCCGGTTTTGGAAGTCCAATACCTCAACTACCTGAAGAGCCTCCTAGATTACCTCCTCTGGCAGAAGGGTTTGGTCCTTTCCTCCAGACAAAAAATGGCGGATTTCTACGGTCTATGAATTCCTCACTTTTCAGGAATGCTAAAAGTGGTGGGAACTTAATCATGCAGGTTTCCAACCCTGTTGTTATGCCTGCAGAAATGGGTTCAGGGATAATGGAGACTTTGCATTATTTGGCATCAGTCGGAATTGAAAAGCTTTCGATGCAGGCAAACAAGTTTATGCCTCTTGAAGATATCACAGGGAAGACAATACAACAAATATCATGGGAATCTATGCCAAACTTAGAAGGCAATGGCAGGCAATGCCATTTGCAGCATGATTTGGCAACGTGGAAAGGTTCTTCTTGCATGCAAAGGGGCttgaaagaattatcatctgatgagttcagttcaatttcaattggcaaccaaggaggttcaggattcttttcattggaaGATCTTGCTCCTTTGGCTATGGATAAAATTGAAGCACTTTCGATGGAGGGTTTAAAAATACAATCTGGGATGTCTGAGGAGGATGCCCCATCAAACATCATTGCAAATTCCTTTAAAAATCTTGCTGGTCTCCAGGCCAAGAGGGTTGACATTGGAAATTCTCTTGGCCTAGATGGAGCTGCTGCTTTACAGTTGTTGAATAACAGAGACAGCAGCGATGAAGTTGATGGGATAATGGAACTATCATTAACTCTTGATGAGTGGATGAGACTAGATTCGGGTGAGATTGATGATATAGATGATATCAGTGAACATACTTTCAAACTTCTTGCAGCCCATCATGCCAACTCTTTCGACGTTGTCCGTGAGAGTTCAAAAGGAAGGAAGAAAAAAGGCAAAGGTCATGGCAGGAAATGTGGTTTGCTAGGAAACAATTTCACAGTAGCACTAATGGTGCAGCTTCGCGATCCTCTGAGAAATTACGAGCCAGTTGGAACACCAATGCTTGCTCTTATACAAGTGGAGAGAGTGTTTGCCCCACCAAAGCAAAAGCTTTACTTGACTGTGTCTGAGGTAGGGAACAATACTGATGAAGATGATGAGTGTGAAATAAGAGCAAAGGTGGAGATGAAAGACAACAAAGAGGAGAGAAGTATTAAAGAAAAAGGCATTGCTCAGTTCAGAATTACAGAAGTCCATGTTGCAGGTCTTAAGATTGAGTCCCAAAAAAAGAAACTTTGGGGTACATCAAGTCAGCAACAATCTGGTTCGCGCTGGTTGATTGCTAATGGAATGAGCAAGAGCAATAAGAATCCACTGATGAAGTCTAAGGTTGCTTCTAAGATTGGCGCTCAGGGCACTACCACAAAGGTGCAACCTGGGGACACATTGTGGAGCATATCGTCTCGTATTTATGGTACTGGTGCAAAATGGAAGGAATTAGGAGCACTAAATCCACACATAAGAAATCCCAATATCATTATACCAAATGAATCTATAAGAATACGTTGA 3258 0.3837 MLPKIEEEHNTLLQDVETIRKTLYMERTLSRNSTSSSSSSSKFTDKDPKPNPNNKEDNLKKDKKSIWNWNLLRALSLTRSKKFNCCFSLQIHLIEGLPLSFNDSTLCVHWKRRDEHLVTPPAKVIKGSAEFQDILSYTCSITGSKSGPHNSAKYEGKHFLLYASVVGVPELDLGKHRLDITRLLPLALEDLEEEKSSGKWTTSFRLSGKAKGAVMNVSFGYVVVGDNNICAPYVLTSRQNCIALSETDINPCQYSPRFIDEVKDLHEVLMSSKSVMESSADVLYKKIDDENTCGPLHMKHELVLKENLEPIKLDACRSPDTEIGKLVEHQCNERKTCSPVCGESEFDVFQESLETFETDGYSLSESVNENSDDFSVVDQGIEFNVSDSSKESVVVHEISNKSDELWTKEILLQEIESALNSISELETIALESPKIMEVTSECKFRKSQSLDDFTESVASEFLSMLGVDHSPTGFSSESDPESPRECLLRQFEKDVGSECFSLFNVDYDEEEEEDCVYDASEQCKFSTGIRAPSLLHDLQEGLEFENVRSKPKGHILEDSETEALMREWGWSEESFQHSPPKGVAGFGSPIPQLPEEPPRLPPLAEGFGPFLQTKNGGFLRSMNSSLFRNAKSGGNLIMQVSNPVVMPAEMGSGIMETLHYLASVGIEKLSMQANKFMPLEDITGKTIQQISWESMPNLEGNGRQCHLQHDLATWKGSSCMQRGLKELSSDEFSSISIGNQGGSGFFSLEDLAPLAMDKIEALSMEGLKIQSGMSEEDAPSNIIANSFKNLAGLQAKRVDIGNSLGLDGAAALQLLNNRDSSDEVDGIMELSLTLDEWMRLDSGEIDDIDDISEHTFKLLAAHHANSFDVVRESSKGRKKKGKGHGRKCGLLGNNFTVALMVQLRDPLRNYEPVGTPMLALIQVERVFAPPKQKLYLTVSEVGNNTDEDDECEIRAKVEMKDNKEERSIKEKGIAQFRITEVHVAGLKIESQKKKLWGTSSQQQSGSRWLIANGMSKSNKNPLMKSKVASKIGAQGTTTKVQPGDTLWSISSRIYGTGAKWKELGALNPHIRNPNIIIPNESIRIR 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00355 1085 MobiDBLite consensus disorder prediction 28 59 - -
Car07g00355 1085 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 7 1084 - -
Car07g00355 1085 SUPERFAMILY LysM domain 1036 1084 IPR036779 -
Car07g00355 1085 ProSiteProfiles LysM domain profile. 1036 1084 IPR018392 -
Car07g00355 1085 ProSiteProfiles C2 NT-type domain profile. 75 223 IPR019448 -
Car07g00355 1085 MobiDBLite consensus disorder prediction 28 47 - -
Car07g00355 1085 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 80 224 IPR019448 -
Car07g00355 1085 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 7 1084 IPR039614 -
Car07g00355 1085 SMART LysM_2 1037 1085 IPR018392 -
Car07g00355 1085 Pfam LysM domain 1039 1084 IPR018392 -
Car07g00355 1085 Gene3D LysM domain 1027 1085 IPR036779 -
Car07g00355 1085 Coils Coil 408 428 - -
Car07g00355 1085 CDD LysM 1039 1084 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00355 Car-Chr7 3160728 3164562 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00355 - - lja:Lj4g3v2179220.1 1214.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00355 07 3160728 3164562 Car07g00355 07 3160728 3164562 ECH
Car07g00355 07 3160728 3164562 Car01g01225 01 15075249 15079909 PCT