Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00325 ATGGCTGAAAATTACCATTATGCCACTTATTTCATACTACTACTAATAACCATAACCAATTTAACATCCACCTTAGGAAAAATCGAAAAATGGAAAACTGTAGTACCACGAGAGCATACCATAATTGTTAACACTACTATATCCAACAAATTCCATAACGACCTTAAAACAATCCAAGTTGCTTCCAATGACTATGGAAACATCATCCACGAATTACCATTAGCAGTGTTTCATCCATCTTGTATACAAGACATAGCAACCTTAATCAAAATCTCATACAATAGCTCTGTTCCTTTCACTATAGCAGCCAGAGGCCAAGGTCACTCCACTAGTGGACAAGCCATGGCACGTGATGGTGTTGTAGTTGACATGGCTAGCTATAGAAAACAGAGAAATGGGGGTGCAATTAGTGTTTCTGAAGACCCTTTGATTGGTTACTATGTTGATGTTGGTGGAGAACAACTTTGGATTGATGTTTTGTATGAAACGTTTGAACATCGACTTGCACCTGTTTCTTGGACCGATTATCTTTATCTAACGGTTGGAGGGACACTTTCTAATGCTGGAATTAGTGGACAGACATTTCGCTATGGACCTCAAATCACCAATGTTCATGAAATGGATGTCATTACGGGAAAAGGAGATTTGGTAACGTGTTCTTCTAAGAAGAATTCAGAGTTATTTCACGCGCTTCTTGGAGGCTTAGGACAATTTGGGGTTATAACAAGGGCAAGAATTTCTCTTGAACCAGCTCCCACATGGGTTAAGTGGGTGAGAGTGCTTTATAGTGACTTTTCTGATTTTACAAAAGATCAGGAACGATTAATATCGATCGATGGAAGTACAAAAAATATTGAATTGGATTTTTTGGAAGGAATGCTGCTAATGCAACAAGGATCCATAAATAATTGGAGATCCTCTTTCTTCCCTCTATCTCACCATTCTAGAATATCCTCTTTAATAACTAAGCATAACATCCTCTACTGTCTTGAATTGGCTAAATATTATGATCATCAATCCGAGAAAATGGTCGACAAGGAAATTCaagttttacttcaaggattagcttatatccctggactacattatgagaaaaatgtgtcATATGTTGAGTTCTTGAATAGAGTCCGAAGTGGAGAGTTGAAACTTCAGTCACAAGGACTCTGGCATGTTCCTCATCCATGGCTTAATTTGTTTGTACCAAAATCTCAAATCTTGGATTTTAATTCAGGTGTATTCAATGATATAATTCTTAAAAGAAACATCACTAGTGGAATTGTCCTGATTTACCCCATGAATAAAAGCAAgtgggatgataggatgtcaacaattacaccagacgaggatgttttctatgcggttggatttttacactcaaGTTTATACAAGATCTACTTTAGATATGTTATAGATTGTTAA 1419 0.3354 MAENYHYATYFILLLITITNLTSTLGKIEKWKTVVPREHTIIVNTTISNKFHNDLKTIQVASNDYGNIIHELPLAVFHPSCIQDIATLIKISYNSSVPFTIAARGQGHSTSGQAMARDGVVVDMASYRKQRNGGAISVSEDPLIGYYVDVGGEQLWIDVLYETFEHRLAPVSWTDYLYLTVGGTLSNAGISGQTFRYGPQITNVHEMDVITGKGDLVTCSSKKNSELFHALLGGLGQFGVITRARISLEPAPTWVKWVRVLYSDFSDFTKDQERLISIDGSTKNIELDFLEGMLLMQQGSINNWRSSFFPLSHHSRISSLITKHNILYCLELAKYYDHQSEKMVDKEIQVLLQGLAYIPGLHYEKNVSYVEFLNRVRSGELKLQSQGLWHVPHPWLNLFVPKSQILDFNSGVFNDIILKRNITSGIVLIYPMNKSKWDDRMSTITPDEDVFYAVGFLHSSLYKIYFRYVIDC 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00325 472 PANTHER CYTOKININ DEHYDROGENASE 3 16 462 - -
Car07g00325 472 PANTHER GULONOLACTONE OXIDASE 16 462 - -
Car07g00325 472 Pfam FAD binding domain 73 220 IPR006094 GO:0050660
Car07g00325 472 Gene3D - 254 460 IPR016170 -
Car07g00325 472 Gene3D - 56 123 IPR016167 -
Car07g00325 472 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 252 460 IPR015345 GO:0009690|GO:0019139|GO:0050660
Car07g00325 472 Gene3D - 124 253 IPR016169 -
Car07g00325 472 ProSiteProfiles PCMH-type FAD-binding domain profile. 69 251 IPR016166 GO:0071949
Car07g00325 472 SUPERFAMILY FAD-binding/transporter-associated domain-like 49 250 IPR036318 GO:0050660
Car07g00325 472 SUPERFAMILY FAD-linked oxidases, C-terminal domain 252 460 IPR016164 GO:0003824|GO:0050660
Car07g00325 472 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 73 108 IPR006093 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00325 Car-Chr7 2940665 2945963 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00325 K00279 - gmx:100787676 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00325 07 2940665 2945963 Car07g00325 07 2940665 2945963 ECH
Car07g00325 07 2940665 2945963 Car01g01195 01 14477698 14482408 PCT