Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01195 ATGGCTGAAAATTACCCTTTTCCAACATACTTCATTCTCCTAATAATAACCATAACACGTTTAATATCGACCGTAGGAAAAACCGAACAATGGAAATCTTCACTTCCAATAGAATTATCGAAACCAAACAACATATTATTCAAAAACGTAATAAACGACCCAAAAACAATAGAGATAGCTTCAAGTGATTACGGCAACCTCGTACACGAATTCCCAGCAGCTGTGTTTCGTCCAACAACGGTGAACGACATAGTAAGTCTGGTGAAATTGTCGTTTAATAGTTCCGTACCATTCCGCATCGCGGCTAGAGGGCAAGGACATTCCACGTGCGGACAAGCTATGGCACGTGATGGGGTCGTGGTTGATATGAAAGGTTTAAGAGAGATtaataataataataataatGTTGGGATTAAGGTTTTTAAGGAAGGTAATTATGTTGATGTTGGAGGGGAACAACTTTGGATTGATGTGTTGTATGGTACACTTGAATATGGACTTGCACCTGTTTCTTGGACGGATTATCTTTACTTAACGGTTGGAGGGACACTCTCAAATGCTGGTATTAGTGGTCAAACTTTTCGTTATGGTCCTCAAATTACTAGTGTTCATCAAATGGATGTTGTCACTGGAAAAGGAGAATTTGTAACATGCTCTAAACAGAAAAATTCGGAATTATTTCATGGTGTTCTTGGAGGATTAGGACAATTTGGAATTATAACAAGGGCAAGAATTGCTCTTGAGCCAGCACCAAAGAGGGTTAAATGGGTAAGGCTTCTGTATAGTGATTTTTCTATTTTTACCAAAGATCAAGAACGTTTAATTTCAATGAAAGGAAGCAAAAATAGTTCATTGGATTATTTGGAAGGGATGCTATTAATGCATCAAGGACCCATAAATAATTGGAGATCTTCTTTCTTCCCTTTAGCCGACCATCAAAGAATTATTTCCCTAGTAACTCAACATAGGGTCCTCTATTGCCTGGAAATTGCTAAATATTATGATGACCAATCTGAAATCAATGTCAACAAGGAAATTCAAGTTTTGCTTCAAGGACTGAATCATATCCCTGGATTTTACTATGAAAAAAATGTGTCATTTGTGGAGTTCTTGAATAGAGTTAGAAGTGGAGAGTTGAAGCTTCAATCACAAGGATTATGGGATGTTCCACATCCATGGCTTAATTTATTTATACCAAAATCTCGAATCTTGGATTTTAATTCAGGAGTCTTCAAGAAAATAATTTACAAACGGAACATTACCACAGGACCTGTATTGGTTTACCCAATGAATAGAAACAAGTGGGACAATAAGATGTCAGCAAGAATACCAGATGAGGAGGATGAAATCTTCTATGCTGTTGGATTTTTGCACTCAAGTGGGTTTGATAATTGGAAGGAATTTGATGCTCAAAACAGAGAAATATTGCAATTTTGTAATGATGTTGGGATTAAGTATAAGTTATATCTTCCCCACTACCGCACACAGGAAGATTGGACAAACCATTTTGGCCCAAAATGGACAACTTTTTTACAAAGAAAATTTCAGTTTGATCCAAGAATGATTCTATCACCTGGACAAAGAATCTTCAACAACAATTAA 1602 0.3645 MAENYPFPTYFILLIITITRLISTVGKTEQWKSSLPIELSKPNNILFKNVINDPKTIEIASSDYGNLVHEFPAAVFRPTTVNDIVSLVKLSFNSSVPFRIAARGQGHSTCGQAMARDGVVVDMKGLREINNNNNNVGIKVFKEGNYVDVGGEQLWIDVLYGTLEYGLAPVSWTDYLYLTVGGTLSNAGISGQTFRYGPQITSVHQMDVVTGKGEFVTCSKQKNSELFHGVLGGLGQFGIITRARIALEPAPKRVKWVRLLYSDFSIFTKDQERLISMKGSKNSSLDYLEGMLLMHQGPINNWRSSFFPLADHQRIISLVTQHRVLYCLEIAKYYDDQSEINVNKEIQVLLQGLNHIPGFYYEKNVSFVEFLNRVRSGELKLQSQGLWDVPHPWLNLFIPKSRILDFNSGVFKKIIYKRNITTGPVLVYPMNRNKWDNKMSARIPDEEDEIFYAVGFLHSSGFDNWKEFDAQNREILQFCNDVGIKYKLYLPHYRTQEDWTNHFGPKWTTFLQRKFQFDPRMILSPGQRIFNNN 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01195 533 SUPERFAMILY FAD-binding/transporter-associated domain-like 49 249 IPR036318 GO:0050660
Car01g01195 533 Gene3D - 253 489 IPR016170 -
Car01g01195 533 Gene3D - 123 252 IPR016169 -
Car01g01195 533 Pfam FAD binding domain 72 219 IPR006094 GO:0050660
Car01g01195 533 Gene3D - 53 530 IPR016167 -
Car01g01195 533 ProSiteProfiles PCMH-type FAD-binding domain profile. 68 250 IPR016166 GO:0071949
Car01g01195 533 SUPERFAMILY FAD-linked oxidases, C-terminal domain 251 531 IPR016164 GO:0003824|GO:0050660
Car01g01195 533 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 72 107 IPR006093 GO:0016491
Car01g01195 533 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 251 530 IPR015345 GO:0009690|GO:0019139|GO:0050660
Car01g01195 533 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 11 531 - -
Car01g01195 533 PANTHER GULONOLACTONE OXIDASE 11 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01195 Car-Chr1 14477698 14482408 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01195 K00279 - gmx:100804431 830.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00325 07 2940665 2945963 Car01g01195 01 14477698 14482408 PCT