Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00323 ATGGCAGACCCAACAAGTATCATAGCAACATGGTTAACACCTTCTTCCCTTTTCATCTTTGTAAACCTCGTCATAGGTACCATAGCTATCACTTCTCGTTTCTCTTCTTCTTCTCAACCCAAAAACAAAAACCAACCTCAACTCACTTCCTCACCCTCACTTCTCCACCGTGTTAGGTCCTTTAATCTCCGTCACCATTACAACAACGACGACGAACCCGAGTCAGACTCCGAGTTCACTCACCCCCAACTCGTTCCAAAACCGTCTCTGTTAAAGCGTGTCGTGTCCTTCAACCTCTCGTTCAacaaacaccacccaccacccacacagacaataacacaaacacaTTGCGTGCAACCCGAAGCCGAAAACATGGGTCCGGATCCAGTTAAGACGGAACTGGATTCGGGTCCAGACCCGGTTAAAGGTGAACTGGGTTCGGGTCTGGATCTGAATCCGGGTTGTGATTCGGAGAAGAGTAAGGTGAAGATATTGAAGAAATCTATGAGCGAGAAGGAGTGTTTGATGAAGTCGGAGTGGGATGAAGAGGAGGATGAAGAAACGGTGGAGCAAAGGAGGCCTGCGACGACGGGAAGGAGTGAAGAGTCGGAAGATAAAGAGGTGGATGCAAAAGCTGATGATTTTATTAACAGGTTTAAGAAGCAGTTGAGGTTGCAGAGGCTTGATTCATTTCTCCGACGGGCAGACACCATGTGA 717 0.4491 MADPTSIIATWLTPSSLFIFVNLVIGTIAITSRFSSSSQPKNKNQPQLTSSPSLLHRVRSFNLRHHYNNDDEPESDSEFTHPQLVPKPSLLKRVVSFNLSFNKHHPPPTQTITQTHCVQPEAENMGPDPVKTELDSGPDPVKGELGSGLDLNPGCDSEKSKVKILKKSMSEKECLMKSEWDEEEDEETVEQRRPATTGRSEESEDKEVDAKADDFINRFKKQLRLQRLDSFLRRADTM 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00323 238 Pfam Domain of unknown function (DUF4408) 7 34 IPR025520 -
Car07g00323 238 Pfam Cotton fibre expressed protein 205 234 IPR008480 -
Car07g00323 238 MobiDBLite consensus disorder prediction 189 211 - -
Car07g00323 238 PANTHER COTTON FIBER (DUF761) 3 71 - -
Car07g00323 238 PANTHER COTTON FIBER (DUF761) 160 233 - -
Car07g00323 238 MobiDBLite consensus disorder prediction 173 211 - -
Car07g00323 238 PANTHER DUF4408 DOMAIN PROTEIN 3 71 - -
Car07g00323 238 PANTHER DUF4408 DOMAIN PROTEIN 160 233 - -
Car07g00323 238 MobiDBLite consensus disorder prediction 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00323 Car-Chr7 2927025 2928432 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00323 - - var:108322704 188.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00323 07 2927025 2928432 Car07g00323 07 2927025 2928432 ECH
Car07g00323 07 2927025 2928432 Car01g01188 01 14290447 14291396 PCT