Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01188 ATGACTGAAACATGTTCAGTTTCAGATACCATAACAACTTGGATTACTCCATCCTCTATATTCTTAATGGTAAATCTTGTCATCGGCACCATCGCTATTATAACTCGTTTCGCAACTCACAGAAAACGCCAACTCGACTCGTCTCACAAACTCGTCCGTTCCACCTCATCGTTTCAACTCGGTTGCTATAAATATGAACCGTCAACAATAACAATGCCCGAAGAAACACAAATCGAACCGGTTCAAAATAACGACTCATCCCGGTTGAACCAGGTCAAGTCCGGTCTATGTTTAACACAAATTGATGAAGAACCGGTTGAGCCGACACCGAATCCGTTGGTACGAGCTCCGTCGCTCTTGGAACGACTGTTGTCGATCAGTTTCCGACGATCGGAGTCGGTAAAGGTGGAGGAGGAGAAGAAACCTGAATCGGAATCGGAAGCCGATACTGAGGAAGGTGTGGATGCAAAAGCTGATGATTTTATTAAAAGATTTAAGCAGCAACTTAGGTTGGAAAGGCTTGATTCAATGCTACGTTACAAAGATATACTTCATCGACGTTGA 564 0.4362 MTETCSVSDTITTWITPSSIFLMVNLVIGTIAIITRFATHRKRQLDSSHKLVRSTSSFQLGCYKYEPSTITMPEETQIEPVQNNDSSRLNQVKSGLCLTQIDEEPVEPTPNPLVRAPSLLERLLSISFRRSESVKVEEEKKPESESEADTEEGVDAKADDFIKRFKQQLRLERLDSMLRYKDILHRR 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01188 187 MobiDBLite consensus disorder prediction 134 156 - -
Car01g01188 187 Pfam Cotton fibre expressed protein 152 186 IPR008480 -
Car01g01188 187 PANTHER COTTON FIBER (DUF761) 129 186 - -
Car01g01188 187 PANTHER COTTON FIBER (DUF761) 6 130 - -
Car01g01188 187 PANTHER DUF4408 DOMAIN PROTEIN 129 186 - -
Car01g01188 187 PANTHER DUF4408 DOMAIN PROTEIN 6 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01188 Car-Chr1 14290447 14291396 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01188 - - mtr:MTR_2g039320 169.088
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00323 07 2927025 2928432 Car01g01188 01 14290447 14291396 PCT