Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00297 ATGCGATCAGGAAGTTGTGCATTGCAGCAGACCCTCACAGCTGAGGCTGCTTCAGTTTTGAAGCATTCTCTAGTCTTATCAAGAAGAAGAGGCCATGCACAATTAACTCCTCTTCATGTAGCAACAACTTTGTTAACCTTAAGAGTCACTTCTTTCACAAAAGCATGTCTTAAATCtcaacctcatcatcatcatcatcatcttcatcaccaatcttcatcacaatgtagagctCTTGAGCTATGTTTCAATGTAGCTCTTAATAGGCTTCCAACAAATCCTACTCCTTTGATTCATTCTCAGCCTTCTCTTTCCAATGCTCTCATTGCTGCATTGAAAAGAGCACAGGCTCATCAAAGAAGGGGGTGCATAGAGCAACAACAGCAGCAACAACCAGTTCTTACTGTGAAAGTTGAGCTTGAACAGCTTATTATATCTATTCTTGATGATCCTAGTGTTAGTAGGGTTATGAGAGAAGCTGGTTTTTCTAGTACTCTTGTTAAGAACAATTTAGAAGACTCTAATTCAACTTCTAATTCTGTTTTTAAGTGTTATAATAGTTCTGGTGGTGTTTTTTCATCTCCTTGTTCCCCTTCTAGTAGTGAGAAGAATCATAGAGAAAACATAAACCTTAGTGATTTTAGACACAACCATTTCTTGGCTTCTGCTAAGTATAGTTCTTCTTCTGAGTTTTATAACAAAGTTCTGTTTTCTACAACAAAGAAAGATTCAGATTTTTCCATCATTGGTGCAGCTTCTTCTTCAGGTGGACTTGGTTTGACCCTTCATGCTTCCAGTGTCCTTGATACAAAGCCCTTTAGAAGTAATAAGGAGGAAGAGGATAAGCTTAATTGTTGTGAAGAATGTGCCTCCAATTATGAAAAAGAAGCTCAATTTATTAAACCTGAACAGAAAAAAACATTGCCTTTCTGGCTTCAGTCCCATGGAACGGAAGAACAAAAGAAGGATGGATTAACTGAGTTGAAAACAAAATGGAATAGACTATGCCACTGTCTCCACCAAAACAAACAGCATCGTCCAAACCAAATCCATTGGACCAACAATCACAGTTCAAACCTCAATAATTCATCAAGTTCCATATCTTATAGCTCCAATCTTATACCTCGATTCCGTCGCCAACAATCATGCATCATTGAGTTCAACTTCAATGATAAAAGGCCTGCAACAGAACCAGTCTTTGATTCCCTTGAAAGTATGGAAGATAAAGAAGTAAAGATTAGTCTTACACTTGGAAATGGTGATTCAGGTGAAAAGGTTGGAAATTTAACCGATACAACACATCAACAAGCTCATGTTTGTAAAGTATTGCAGGAGAATGTGCCATGGCAATCTGAAACTGTTCCTTCAATAGCAAAGGCCTTGTTTGATATTGATACCAAATCTGAAAAACAAAGTAAAGTTACATTCAAATGGCTATTTTTACAAGGTAGTGATTTCATATGCAAAAGAAGGTTGGCACTTGCTATTGCAGAATCAGTTTTTGGCTCAGCTGATTTGGTTCTTCACATGGACATGATAAAAAAGGAAACTTTAATAGCACCATTTTCTGAAATGCTTGAAGGAGCGTTGAGAAAACATCAACAGCTTGTGGTTTTAATAGAAAATGTTGATTTTGCTGATACCCAATTCATGAAATATCTCTCAGATGGATATGGAAAAGGAAAGTTTGGAACTTTAAGTAGCAATGATGGGAATTCAGGCCAAGTGATATTCATTTTGACAAATGGTGGCTCCACAAGGATTGAAGAGAAGAATCAAAACAATGTTATGAAATTGTTGTGGCAGATTACTGACACTAAGCCTAATTTAGAAACACCTTGCTTGAGCCGCAAGCGAAGAGCCGAATTGGATTTGTTGATTTCTGAGCTAGGGAGCAAAAAGAAAGACTTTTCAAGACAATCAAGCTTTAACAGTAACACCCATAGGTGCAATCATATCAGCACTTATGCAGCGGATCTCAACAGTAACAATAACACTCTTGATTTGAACATGAAAGCCAATGAAGAGGAAGATGGTGATGATAAAGAAAGGGAAAGTAGATCAATTTCAAGTGATTTGACTAGAGAAAATATAGCTGATCCATTGAACTCAAATGGGTTTCTTGATTCAATTATGAATAGGTTTGAGTTCAACACAAGTTCATTTAGAGACAGAGAAATGACACAGTTTTTTCTGTCCAAGATTAAAGGATCATTTGAAGAAGTTTTTGGTAAAAAAAATGTGGTGAATTTTAGTGTAGATGAGAAAGTTATTGAAGATATGTGTTTGGGGTGTTGTTTTATCACTAACAAAATGTTTGAGAAATGGCTTAAAGACATTTTCCAAAACAGTTTAGAAACAGTTAACTTTGGTGGGAAGGAGGGTATACTTTTTAGACTTTGTTTGGGTGATAGAAATTGGGAATTGGATAGTGGGTTTATGGGTTCTTCTTTGCCTAAGAGCATTCAAGTTAACTGCTTTATAGAGTGA 2490 0.357 MRSGSCALQQTLTAEAASVLKHSLVLSRRRGHAQLTPLHVATTLLTLRVTSFTKACLKSQPHHHHHHLHHQSSSQCRALELCFNVALNRLPTNPTPLIHSQPSLSNALIAALKRAQAHQRRGCIEQQQQQQPVLTVKVELEQLIISILDDPSVSRVMREAGFSSTLVKNNLEDSNSTSNSVFKCYNSSGGVFSSPCSPSSSEKNHRENINLSDFRHNHFLASAKYSSSSEFYNKVLFSTTKKDSDFSIIGAASSSGGLGLTLHASSVLDTKPFRSNKEEEDKLNCCEECASNYEKEAQFIKPEQKKTLPFWLQSHGTEEQKKDGLTELKTKWNRLCHCLHQNKQHRPNQIHWTNNHSSNLNNSSSSISYSSNLIPRFRRQQSCIIEFNFNDKRPATEPVFDSLESMEDKEVKISLTLGNGDSGEKVGNLTDTTHQQAHVCKVLQENVPWQSETVPSIAKALFDIDTKSEKQSKVTFKWLFLQGSDFICKRRLALAIAESVFGSADLVLHMDMIKKETLIAPFSEMLEGALRKHQQLVVLIENVDFADTQFMKYLSDGYGKGKFGTLSSNDGNSGQVIFILTNGGSTRIEEKNQNNVMKLLWQITDTKPNLETPCLSRKRRAELDLLISELGSKKKDFSRQSSFNSNTHRCNHISTYAADLNSNNNTLDLNMKANEEEDGDDKERESRSISSDLTRENIADPLNSNGFLDSIMNRFEFNTSSFRDREMTQFFLSKIKGSFEEVFGKKNVVNFSVDEKVIEDMCLGCCFITNKMFEKWLKDIFQNSLETVNFGGKEGILFRLCLGDRNWELDSGFMGSSLPKSIQVNCFIE 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00297 829 Coils Coil 276 296 - -
Car07g00297 829 Gene3D - 422 627 IPR027417 -
Car07g00297 829 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 197 - -
Car07g00297 829 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 255 803 - -
Car07g00297 829 Coils Coil 657 677 - -
Car07g00297 829 ProSiteProfiles Clp repeat (R) domain profile. 8 179 IPR004176 -
Car07g00297 829 MobiDBLite consensus disorder prediction 673 691 - -
Car07g00297 829 PANTHER PROTEIN SMAX1-LIKE 5 1 197 - -
Car07g00297 829 PANTHER PROTEIN SMAX1-LIKE 5 255 803 - -
Car07g00297 829 MobiDBLite consensus disorder prediction 673 697 - -
Car07g00297 829 Gene3D - 9 177 IPR036628 -
Car07g00297 829 SUPERFAMILY Double Clp-N motif 12 171 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00297 Car-Chr7 2695767 2699849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00297 - - aprc:113853131 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00297 07 2695767 2699849 Car01g01160 01 13581334 13585434 PCT