Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01160 ATGCGCTCAGGAGTTTCTACATTGCAACAGACACTAACAGCCGAGGCTGCTTCAATCTTGAAGCACTCTCTAGGCTTAGCTAGAAGAAGAGGACATGCTCAACTAACTCCTCTTCATGTTGCTGCAACTTTATTCACTTCTTCTTCTACTTTAAGACATGCTTGTCTCAAATCTCAACAACAAAACtcttcttcttcttcttcttcacatattcttcAATGTAGAGCTCTTGAACTTTGTTTCAATGTTGCTCTCAATAGACTTCcaacaacaacaacaacaCCTTTAATTCATCAACCTTCTCTTTCTAATGCACTCATTGCTGCTCTTAAAAGAGCACAAGCTCATCAAAGAAGAGGTTGCATTGaacaaaaccatcaacaacaacagcaaccacTTTTGAGTGTTAAAGTTGATCTTCATCAGCTTGTTATTTCTATTCTTGATGACCCTTCTGTTAGTAGAGTTATGAGAGAAGCTGGTTTTTCAAGTACTTGTGTTAAAAATAATTTGCAACAACAGTCTTCAACAAACCcttcttctattttcacttcttcttcttcttcttcttcACTTTCTCTTGGTGATAATCATATAGAAATTGACCCTTTTGGTCACTTTAGACAGAACATTAATCAAAATCATTTCTTGAGTTCTTATGGAAGTTATGGTAATTATGGTTCTGTTCTGTTTTCACCTCAGAAGAAACCAGCATCTGTGTTTCCTTTACAATCTTCTAAGGAAGATGTGAAACTTGTTTTTGATGTTTTTTTGAGGAAGAACAAAAAAAGGAACACTGTGATAGTTGCTGATTCAGTTTCATTAACTGAAGGACTAGTTGGTGAGTTGATGGGAAAATTTGAGAGAGGTGAAGTTCCTGATGAGTTGAAAACAACTCATTTCATAAAGTTTCAGCTTGTTTCATTGAGGTTTATGAAAAGGGAAGAACTTGAAATCAATCTAGTTTCATTGAAAAGAAAGATTGATTCTTTTGCATTAGGAGGTGTTGTTTTATATGTTGGTGATTTGAAGTGGATAGTGGATGGAATTTTGAATGAGAAAGAGGGTGAAGAAGTTTGTGATTATTATAACCATGTTGATCATATAGTAGAAGAAATTGGAAAGTTGTTTTGTGAAAAAGAGAATGTAAACAATAGTAAGTTGTGGCTTGTTGCAACATCAAGTTATCAAACTTATATGAAGTGTCAAATGAGGATACCATCTCTTGAGAATCAATGGGGGCTTCAAGCTGTTCCTGTTCCATCAGGTGGACTTGGTCTGAGTCTTCATGCTTCAAGTGTGCATGATTCAAAAATGAGTATGTCATATCCTATAATGGAATCAAAGCTCTTTAGTAACATGGAGGAGAATGATAAGTTAAATTGTTGTGAAGAATGTATCATCAATTATGAAAAAGAAGCTGAATTGTTCAAACCAGGACAGAAGAATCTGTTGCCTTCATGGCTTCAGTCTCATTCTACAGAAGCTCATCAAAAGGATGAATTAATCCAGTTGAAGAAAAAGTGGAACAGATTATGCCAATGTCTCCACCAAAACAAACAACCACAAAACCATTGGAGCAACAACACTTTACATATCAATCAGAGTTCAAATGCAAAGATCTATCCTTACAATTCATCATACCCTTGGTGGCCAAACCAAACTAAAAGTTCAATATCTTTTGCTGATTCTGCAGCCAAACCAGCTTATAGCTCAAACATTATACCTCGATTCAGGCACCAACAATCATGCACAACAATTGAGTTCAATTTCAACAATGATGCAACACAGAAAAAGCAAACAACAACAGCCTTGGATTCTCTTAAAGAAGTAAAGATAACTCTTGGTCTTGGAAATTCAACATTCAATGGTTCGGAGCGAAAAAAGGTGGCGAGTTTAATCGATGATACAACACTGCAAAGGGATTATATTTGTAAACTGTTGCAGGAGAATGTTCCATGGCAATGTGAAACAGTTAGTGCAATAGGAGAAGCTTTGGTTGATTCAAAATCATCAAAGGAAAGTGTTAGTTGGTTTTTTTTTAAGGGGAGTGATAGTGTTGGGAAGAAAAGGTTGGCACTTTCCATTGCAGAATCAGTTTTTGGATCACTTGATGTGTTTTTTCAGTTTGATATGTTGAAGAGAGAGAATTCAGAGACACCCTTTTGTGAAATGGTTTCTGGAGTGTTGAAGAATCATGAAAAGTTTGTTCTTTTGGTTGAAAATGTTGATTTTGGTGATACCCTTTTAAGGAAATTGGTTGCAGATGGATTTGAGAATGCAAAGTTTGGAACTTTAGGCCAAGGAATAATCATATTGACCAATGGTGAAGATCAGAAAAATGAATCAGTGATGAAGTTGGTTTTGCAGATAAGTGAAAATGAAAATAAACCAACTTTGGAGTTATCATCATCACCTTGTTTGGGAAACAAAAGAAGGGCTGAACTTGATTTATTTGGCAAGATAATGAAAAATCCAAGGATTGAAGAGAATGAAGAGGGTGTTCTGGTTTGTGCAAAAGGGAACAAAAAGAGAGAATTTTCAAGACAATCAAGTTTTAACAACACACTTGACTtgaacatggaagctgatgaagaagatgaagatgatgaGGGGCAAAATAGTCCAATTTCAAGTGATTTGACAAGAGAAACAGTAGTTGAACCATTGATCTCAAATGAGTCACTTGATTCAATTGAGAATTTCTTTGAGTTCAATGGAAGTCCAATAAAGGATAAGGAAGTCAAAGAAGTTTTTAAGTCAAGGGTAAAAGAGTCATTTGAGGAGGTTTTTGGGAAAAATTGTGTGGGGAAATTTAGTGTACAAGATAAGGTGATAGAGGAAATAGGTGTTGGGTGTGGTTCATTTACTAACAAAATGTTTGAGAAATGGCTAAAAGACATTTTTCAAAAGAGTTTAGAGGGTGTTATTAGCAATGGATGGGGGAAAGGGGGTATAGTTTTTACACTTTGTTGGGATGGTAAAGAGGATAGAAAATGGGATAGTGGGTTTATGGGTTCATGTTTACCCAAAAATATCCAAGTTGTTAACAATTTCATGGATTGA 3066 0.3382 MRSGVSTLQQTLTAEAASILKHSLGLARRRGHAQLTPLHVAATLFTSSSTLRHACLKSQQQNSSSSSSSHILQCRALELCFNVALNRLPTTTTTPLIHQPSLSNALIAALKRAQAHQRRGCIEQNHQQQQQPLLSVKVDLHQLVISILDDPSVSRVMREAGFSSTCVKNNLQQQSSTNPSSIFTSSSSSSSLSLGDNHIEIDPFGHFRQNINQNHFLSSYGSYGNYGSVLFSPQKKPASVFPLQSSKEDVKLVFDVFLRKNKKRNTVIVADSVSLTEGLVGELMGKFERGEVPDELKTTHFIKFQLVSLRFMKREELEINLVSLKRKIDSFALGGVVLYVGDLKWIVDGILNEKEGEEVCDYYNHVDHIVEEIGKLFCEKENVNNSKLWLVATSSYQTYMKCQMRIPSLENQWGLQAVPVPSGGLGLSLHASSVHDSKMSMSYPIMESKLFSNMEENDKLNCCEECIINYEKEAELFKPGQKNLLPSWLQSHSTEAHQKDELIQLKKKWNRLCQCLHQNKQPQNHWSNNTLHINQSSNAKIYPYNSSYPWWPNQTKSSISFADSAAKPAYSSNIIPRFRHQQSCTTIEFNFNNDATQKKQTTTALDSLKEVKITLGLGNSTFNGSERKKVASLIDDTTLQRDYICKLLQENVPWQCETVSAIGEALVDSKSSKESVSWFFFKGSDSVGKKRLALSIAESVFGSLDVFFQFDMLKRENSETPFCEMVSGVLKNHEKFVLLVENVDFGDTLLRKLVADGFENAKFGTLGQGIIILTNGEDQKNESVMKLVLQISENENKPTLELSSSPCLGNKRRAELDLFGKIMKNPRIEENEEGVLVCAKGNKKREFSRQSSFNNTLDLNMEADEEDEDDEGQNSPISSDLTRETVVEPLISNESLDSIENFFEFNGSPIKDKEVKEVFKSRVKESFEEVFGKNCVGKFSVQDKVIEEIGVGCGSFTNKMFEKWLKDIFQKSLEGVISNGWGKGGIVFTLCWDGKEDRKWDSGFMGSCLPKNIQVVNNFMD 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01160 1021 MobiDBLite consensus disorder prediction 863 883 - -
Car01g01160 1021 Gene3D - 9 177 IPR036628 -
Car01g01160 1021 PANTHER PROTEIN SMAX1-LIKE 5 1 996 - -
Car01g01160 1021 SUPERFAMILY Double Clp-N motif 12 118 IPR036628 -
Car01g01160 1021 ProSiteProfiles Clp repeat (R) domain profile. 8 178 IPR004176 -
Car01g01160 1021 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 996 - -
Car01g01160 1021 Gene3D - 620 738 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01160 Car-Chr1 13581334 13585434 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01160 - - cam:101489668 1957.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00297 07 2695767 2699849 Car01g01160 01 13581334 13585434 PCT