Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00290 ATGCCGCCGGCTCTATTGGATCCGCCATTGCCAATAACATCGTCGGTGCCTTCTTTAACCTCCGACACCATTTCTCCGGCACCGGCGTCGGAGAGTCAGCTATTCGATAATCTTAGAGGCTTGCAGTGGCGTGTAAATCTTGGTGTTTTGCCATCTTCTTCTTCAACTTCCTTTGATGATCTTCGTCGTGCCACCGCTAATTCTAGAAGGGGGTATGCTAGTTTGAGAGGGAGGCTCTTGGTTGATCCCCACATTACAAAGGATGGAACTAGTTCACCCAATCTTGTCATGGATAACCCACTTTCACAAAATCCAAACAGTACATGGGGTCGCTTTTTTCGCAATGCCGAGCTAGAGAGGATGGTTGATCAGGATTTATCACGTTTATACCCAGAACATGGCAACTATTTCCAGACACAAGGGTGCCAAGGCATATTGAGACGAATTTTATTATTATGGTGTCTTAAACACCCCGGGTATGGTTATAGACAAGGAATGCATGAGTTACTTGCTCCTTTGCTTTATGTTCTCCAAGTTGATGTCGAGCGCGTTGTAGAAGTTCGAAAAGTTTACGACGACCACTTCACAGACAGATTTGATAGTCTCTGTTGTCAAGATAATGATCTTTCTTACAGCTTTGATTTTAGAAAATCTTCAGACTCGACAAAGGATGAAATTGGCTCCCATGGAAATGCAACAAATATCAAGAGTCTTGATGAGCTTGATCCTAAGATACAGACTATTGTATTGCTAAGTGACGCTTATGGGGCTGAAGGTGAACTGGGCGTTGTTTTATCTGAGAAATTTATCGAGCATGATGCTTACTGTATGTTTGACGCTTTAATGAATGGGGCCCACGGTTCAGTTGCAATGGCCGATTTTTTCTCTTATTCCCCTGTTGCTGGGTCTCATACTGGTTTGCCACCCGTAATTGAAGCTTCTGCTGCATTGTATCATTTGCTGTCTCATGTGGATTCATCTCTGTATAGCCATCTTGTTGATCTCGGGGTTGAACCTCAGTACTTTGCTCTGCGCTGGTTGAGAGTTTTATTTGGACGGGAATTTCCACTTGACAACCTCTTGATCATTTGGGATGAAATCTTTTTATCAGATAATAGTAAAATCGAAAAGCACGTGGAGGACAACACAGACCCTGGTTTTAGGATCTTACATTCATCTCGTGGAGCATTTATCTCAGCTATTGCTGTGGCAATGTTACTTCATTTAAGATCTTCACTACTTGCGACCGAAAATCCTACAATCTGTCTCCAGAGATTATTAAGCTTCCCCGAAAACACGGACATTAAAAAACTAATAGAAAAGGCTAAATCCTTGCAGACTCTTGCATTAAGCACTGAAATTTCATCCTCAACACCTACATTTGTAGAGTATGAGAACAAGGGTAAATCGGTTATTACAAGATCAATTACCATTCCATGTGAATCAGGCTCGCCTAAAACTCCTACGAACTTAATACCTGATAATAGCTACTGGGAAGAAAAGTGGAGAGTTGTCCACCGTGCTGAAGAACTAAAACAAGATGGAGTAGAAAAACAGGTTCCATCTCAGAAAAAGAGATGGACAGAAAAGGTCAAGTTAAGTTTGAAAAGAACGGAATCTGACCCGTCTTCGTCAAGGATTACGAGTGGTCAAAAGGAATCTAAGGCATCTGTTAAGCGCAATTTGTTAGAAGATCTTTCCAAGGAACTTGGGTCAGAGGAAGATACAGAAAAACTCTACAATCATGAAATCTTGTGCCAGCAGGATAATCATTCGGTTGCGGTTGAAGTTGAGCAACTAGATGATGGCTCTGAAGGCAGCAACAATTACTGTGGTGAGGATAGACGTCTAAATAGAAACACTGTTAGTGAGGAAAACTCATTGAACCCAGCTAGTCCTCCTAATGAGATCAAAGATCATGAAAATAACTCACTGAAAAGTAGTGTTGGGTCTAATTTTTCCCTTGATGAAATTAATGAAACTTCACATTGTAGTCCCGTTGATTCGCCTCTTCCAATTTCCAATCATCCCGAGAGTAACATGTCTCAGGTGCCAGGGTGGAATAATGATTCCACAGGAAATTCGGCCGCACTTTCTAAAGATAGAAAACTAAATAAATTCCAGTGGCTTTGGAAGTTTGGTCGTAATAACGGCGATTTAATGTCTGATAAAAGAGTTGGTGCTTCTGATGAGGCTGTAAAACCCACCAACAATTGTAGTAATAATCAAAGTAATACAGTACCCTCATCTACTGCTTGTGAGCATAGCAGTCCTGTTAATTTTAAAGGAGAATCTGTAGACCAGAATGTGATGGGAACTTTGAGGAATATTGGGCAGTCCATGCTTGAGCATATTCAGGTGATTGAATCTGCTTTCCAACAAGAGCATGGTCAAGGAGCTTCAGTGGATAATAATATGTCTACAAATGTTATGATTGGCAAAGGGCAGGTTACTGCCATGTCAGCTCTCAAGGAGCTCCGCAAAATTAGCAACCTTTTGTCTGAGATGTGA 2511 0.4154 MPPALLDPPLPITSSVPSLTSDTISPAPASESQLFDNLRGLQWRVNLGVLPSSSSTSFDDLRRATANSRRGYASLRGRLLVDPHITKDGTSSPNLVMDNPLSQNPNSTWGRFFRNAELERMVDQDLSRLYPEHGNYFQTQGCQGILRRILLLWCLKHPGYGYRQGMHELLAPLLYVLQVDVERVVEVRKVYDDHFTDRFDSLCCQDNDLSYSFDFRKSSDSTKDEIGSHGNATNIKSLDELDPKIQTIVLLSDAYGAEGELGVVLSEKFIEHDAYCMFDALMNGAHGSVAMADFFSYSPVAGSHTGLPPVIEASAALYHLLSHVDSSLYSHLVDLGVEPQYFALRWLRVLFGREFPLDNLLIIWDEIFLSDNSKIEKHVEDNTDPGFRILHSSRGAFISAIAVAMLLHLRSSLLATENPTICLQRLLSFPENTDIKKLIEKAKSLQTLALSTEISSSTPTFVEYENKGKSVITRSITIPCESGSPKTPTNLIPDNSYWEEKWRVVHRAEELKQDGVEKQVPSQKKRWTEKVKLSLKRTESDPSSSRITSGQKESKASVKRNLLEDLSKELGSEEDTEKLYNHEILCQQDNHSVAVEVEQLDDGSEGSNNYCGEDRRLNRNTVSEENSLNPASPPNEIKDHENNSLKSSVGSNFSLDEINETSHCSPVDSPLPISNHPESNMSQVPGWNNDSTGNSAALSKDRKLNKFQWLWKFGRNNGDLMSDKRVGASDEAVKPTNNCSNNQSNTVPSSTACEHSSPVNFKGESVDQNVMGTLRNIGQSMLEHIQVIESAFQQEHGQGASVDNNMSTNVMIGKGQVTAMSALKELRKISNLLSEM 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00290 836 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 2 764 - -
Car07g00290 836 MobiDBLite consensus disorder prediction 528 560 - -
Car07g00290 836 MobiDBLite consensus disorder prediction 13 27 - -
Car07g00290 836 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 306 446 IPR035969 -
Car07g00290 836 MobiDBLite consensus disorder prediction 733 760 - -
Car07g00290 836 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 2 764 - -
Car07g00290 836 Gene3D - 310 454 - -
Car07g00290 836 ProSiteProfiles TBC/rab GAP domain profile. 33 371 IPR000195 -
Car07g00290 836 MobiDBLite consensus disorder prediction 540 556 - -
Car07g00290 836 SMART tbc_4 30 417 IPR000195 -
Car07g00290 836 MobiDBLite consensus disorder prediction 600 699 - -
Car07g00290 836 Pfam Rab-GTPase-TBC domain 271 372 IPR000195 -
Car07g00290 836 Pfam Rab-GTPase-TBC domain 119 177 IPR000195 -
Car07g00290 836 MobiDBLite consensus disorder prediction 1 27 - -
Car07g00290 836 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 110 288 - -
Car07g00290 836 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 36 331 IPR035969 -
Car07g00290 836 MobiDBLite consensus disorder prediction 602 699 - -
Car07g00290 836 MobiDBLite consensus disorder prediction 731 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00290 Car-Chr7 2628190 2632736 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00290 K18469 - gmx:100816501 1219.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00290 07 2628190 2632736 Car01g01145 01 11828472 11833624 PCT