Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01145 ATGCAGCAAGCTTTGGTGGATCCATTGTTGTCGACTAATCTGAGCTCCGACTCTGTTTCTCGGAGATCGGACCCGGAGAAACGGAGATTTGGTGATCTTAGAGGGTTACAGTGGCGTATAAATCTTGGGGTGTTGCCTTCTTGTTCTTCTACAGCTTCTGTTGATGATCTTCGTCGAGTTACTGCTGATTGTAGAAGAAGGTATGCTAGTTTGAGAAGGCGTCTCCTTGTTGAACCCCCTATTCCAAAGAATGGAACTAATTCACAGAATCTTGCCATGGACAATCCGCTCTCACAAAATCCTGATAGTACATGGAGTCAATTTTTCCGCAACGCAGAGCTGGAGAGATTGGTTGATCAGGATTTGTCACGTTTATACCCAGAACATGGCAGTTATTTCCAAACACCAGGATGTCAAGGCATGTTGAGACGAATTTTGTTGCTATGGTGTCTCAAGCATCCAGAATGTGGTTATAGACAAGGAATGCATGAATTACTTGCTCCTCTGCTTTATGTTCTCCAAGTTGATTTGGAGCGTCTCTCAGAAGTTCGGAAGCTTTATGAAGATCACTTTACAGACAGATTTGACGGACTTTTATATCAAGAGAATGATCTTACTTACATCTTTGAATTTAGGAAATCTCTTGACACGATACAGGATGAAATTGGCTCCCACGGAAGTGCAACAAAAGCCAATAGTCTTGACGAACTTGAACCCGAGATTCAGTTTATTGTATTACTAAGTGATGCATATGGAGCTGAAGGTGAACTTGGTATTGTATTATCCGAGAAATTCATGGAACATGATGCTTACTGTATGTTTGATGCTTTAATGAAGGGGCCCAATGGTTCGGTTGCAATGGCCGATTTCTTCTCTTCCGTTCCTGTAGCCGGGTCCCATACCGGCGTGCCTCCCGTTATCGAAGCTTCTACGGCATTGTATCATTTGTTATCTCTTGCTGATTCTTCTCTGCATAATCATCTTTTTTATCTCGGGGTTGAACCTCAGTACTTTTATCTCCGATGGTTGCGAGTTTTATTTGGGCGAGAATTTTCACTCGACAACCTATTAATCATTTGGGATGAGGTCTTTGCATCAGATAATTGCAAAGTTGAAATTTTTTCTGATGACGATGTAGATTGTGGATTCAGGATTTTACATTCACCTCGCGGAGCATTTATCTCAGCGATTGCCGTAGCAATGTTACTTTATTTAAGATCTTCTCTACTTGCAACCGAAAACCCTACAACTTGTCTCCAGAGACTACTAAACTTCCCCGAAAACATTAATGTTGAAAAACTACTAGAGAAGGCTAAATCCTTGCAGGGTCTTGCTTTAAGTGTCGATATTTCATCCTCGTCACTTTTGCTCATAGGGTCTCATTACCAAAGTAAAATGGCGCCTACAAGAAACGTGGTCCCTCCGTCAGAATCCGTGTCTCCAAAAACCCCTCTGAATTTTATACCTGATAGTTACTGGGAAGAAAAGTGGAGAGTTGCTCAGAAGACCGAAGAACGTAAGCAAGATGGTGTAGAAAAGCAGGTTCCGACTCGGAAGAAGGGATGGGCAGAAAAGATGAAATTTAGTATGAGAAGAACAGAATCTGATCCACCTCCATCAAGGGTTCAAAGTAGACAAAGGGGATCTAAGATGTCTTTTAGACGCAGTTTGTTGGATGATCTTCGTAAAGCACTTGGTGCAGACGAAAACACAGAACACGAGCAGTGTCATGAAATCGTATGCGAGCAGGATAATATCTCTGAAGAAGTTGAAGTAGAGCGACAAGAAAGTGTTTGTAATAGCGACAACAATTACTCGTCTGATGAAAAATGTCCAAGTGGAAATTCTGGCCGTGAGGAAGATTCATCTACATTTTCTGACTCTGCTAGTCCCCCTAATGAGGCCAACAATCACGAAATTGCCTCAGAAAAAAATAGTGTTACATCTTTTTTATCCCTAGATGAATGCCATGAAACTTCAATTACCAGTCCTATTGATTCACCCCTTCCAATTTCTGATCCTCCAGAGAACATGCCTTCGACATCAGTGTGCAATAATGACGATCAAGAAAAGCATCAATGCAATAAAAATTCAGATACCAGTCCCAATAATTCACCCTTTCCAATCTCTGATCCTCCTCAGAACTTACCTCAGACATCAGAGTCCATTAACGACGACGGTGCAGGAAGTTCAGCCGCAAATTCTAAAGAGAGAAAACAGAATAAATTCCAGTGGTTTTGGAAGTTTGGTTGGAATACCGTTGAGATTATCTCCGAGAAAGTAGTAGGTGCTGCCGAGCCTACAAAATCTACCAACAGTTGTAGCGACCAAAGTAATACACTGCCACCACCAAAATCATTGGACACTTTGAAGAATATTGGACAGTCTATGCTTGATCAAATTCAGGTACTCGAATCTGTTTTCCAACAGGATCGCGGTCAAGGAGCCACTGCATTGGAGAACATATCTAAGAATGTTCTTGTTGGCAAAGGGCAGGTTACTGCCATGACAGCTCTCAAAGAGCTTCGGAAAATCAGCAATCTATTGTCTGAGATGTGA 2559 0.4189 MQQALVDPLLSTNLSSDSVSRRSDPEKRRFGDLRGLQWRINLGVLPSCSSTASVDDLRRVTADCRRRYASLRRRLLVEPPIPKNGTNSQNLAMDNPLSQNPDSTWSQFFRNAELERLVDQDLSRLYPEHGSYFQTPGCQGMLRRILLLWCLKHPECGYRQGMHELLAPLLYVLQVDLERLSEVRKLYEDHFTDRFDGLLYQENDLTYIFEFRKSLDTIQDEIGSHGSATKANSLDELEPEIQFIVLLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMKGPNGSVAMADFFSSVPVAGSHTGVPPVIEASTALYHLLSLADSSLHNHLFYLGVEPQYFYLRWLRVLFGREFSLDNLLIIWDEVFASDNCKVEIFSDDDVDCGFRILHSPRGAFISAIAVAMLLYLRSSLLATENPTTCLQRLLNFPENINVEKLLEKAKSLQGLALSVDISSSSLLLIGSHYQSKMAPTRNVVPPSESVSPKTPLNFIPDSYWEEKWRVAQKTEERKQDGVEKQVPTRKKGWAEKMKFSMRRTESDPPPSRVQSRQRGSKMSFRRSLLDDLRKALGADENTEHEQCHEIVCEQDNISEEVEVERQESVCNSDNNYSSDEKCPSGNSGREEDSSTFSDSASPPNEANNHEIASEKNSVTSFLSLDECHETSITSPIDSPLPISDPPENMPSTSVCNNDDQEKHQCNKNSDTSPNNSPFPISDPPQNLPQTSESINDDGAGSSAANSKERKQNKFQWFWKFGWNTVEIISEKVVGAAEPTKSTNSCSDQSNTLPPPKSLDTLKNIGQSMLDQIQVLESVFQQDRGQGATALENISKNVLVGKGQVTAMTALKELRKISNLLSEM 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01145 852 Pfam Rab-GTPase-TBC domain 113 174 IPR000195 -
Car01g01145 852 Pfam Rab-GTPase-TBC domain 266 373 IPR000195 -
Car01g01145 852 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 11 797 - -
Car01g01145 852 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 98 283 - -
Car01g01145 852 MobiDBLite consensus disorder prediction 597 641 - -
Car01g01145 852 MobiDBLite consensus disorder prediction 536 551 - -
Car01g01145 852 MobiDBLite consensus disorder prediction 714 736 - -
Car01g01145 852 MobiDBLite consensus disorder prediction 504 534 - -
Car01g01145 852 ProSiteProfiles TBC/rab GAP domain profile. 28 367 IPR000195 -
Car01g01145 852 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 11 797 - -
Car01g01145 852 SMART tbc_4 25 413 IPR000195 -
Car01g01145 852 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 304 442 IPR035969 -
Car01g01145 852 MobiDBLite consensus disorder prediction 593 641 - -
Car01g01145 852 Gene3D - 306 447 - -
Car01g01145 852 MobiDBLite consensus disorder prediction 504 555 - -
Car01g01145 852 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 32 327 IPR035969 -
Car01g01145 852 MobiDBLite consensus disorder prediction 660 736 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01145 Car-Chr1 11828472 11833624 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01145 K18469 - gmx:100812967 1115.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00290 07 2628190 2632736 Car01g01145 01 11828472 11833624 PCT