Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03667 ATGGCAGTGTTGAATTTCAACATGTTTCTGTTACTCTCTCTTTTATCCATTATTATTAATATCACTCGTATCGATGCTATAATTGAACCTACTCATCTTCTCAATCGGAGCAGTTTCCCGCCAGATTTTGTTTTCGGAACAGCTTCCTCTGCATATCAGTATGAAGGTGCTGCAAGGGAAGGTGGAAAAGGACCCAGTAATTGGGATACCTTCACTCATAAATACCCAGAAAAAATTAAAGATGGAAGTAATGGAGATGTAGCCGACGACTCATATAATCGGTACAAGGATGATATTGGAATCATGAAGTATATGAATATGGATGCTTATAGATTCTCCATTTCTTGGTCTAGAGTGCTACCAAAAGGAAAGCTTAGTGCAGGTGTAAACCATGAAGGAATAAATTACTATAACAACCTCATCGACGAACTATTGGCTAATGGTCTGCAACCATATGTGACAATTTTCCATTGGGACCTTCCCCAAGCCTTAGAGGACGAGTATGGTGGTTTTTTAAGCCCTCGCATTGTAGAAGATTTTAGGGACTATGCTGAACTTTGCTTCAAAAAATTTGGTGATAGGGTGAAACATTGGATTACATTGAATGAACCAAGAAGTGTGAGCAAGAATGGCTATGCAAATGGAAGGTTTGCACCAGGTCGATGTTCAGATTGGTTAAAAATGAATTGCACAGGAGGTGATTCAGGAACAGAACCATATTTGACTTCGCACTACCAACTTCTTGCTCATGCTGCCGCTGCAAAATTGTACAAGACCAAGTATCAGGCTTCTCAAAATGGTTTAATAGGGATTACCTTAAACTCTGACTGGTATGTGCCAATCTCCAAAGAAATGTCAGATCGTGATGCTGCACAACGAGCCCTCGACTTCATGTTTGGATGGTATATGGAACCACTCACAAAAGGCGAGTATCCGAAAAGCATGCGAGCTATGGTGGGAAGTCGGCTACCAAAGTTCTCCAATGAAGAATCCGAACAACTTAAGGGGTCCTTCGATTTTCTGGGCCTAAACTATTACTCATCCTTTTATGCTGCTCATGCACCTTACCTACGTGATGCTAGACCAGCCCTACAAACTGATTCTCTAGTTAAATTTACAAATCAGCATGATGGCAAGCCCCTTGGTCCAATGGCCGCTTCCAACTGGTTATGCATTTATCCACGAGGATTTCGACAACTGCTGCTTTTCATCAAAAAGCAGTATAACAACCCTGTAATATACATTACTGAAAATGGTTATGACGAGTTCAATGATCCAACACTATCACTTGAAGAATCCCTTATAGATACTTATAGAATTGATTACTTTTATCGTCATCTTTATTATCTTCAAACCGCAATCAGGGATGGTGTGAATGTAAAGGGATATTTTGCATGGTCATTGTTGGATAACTTGGAATGGGACTCTGGTTACACCGTGCGATTTGGACTCGTCTTTGTAGATTTTAAAGATGATTTGAAAAGATACCCAAAACTCTCGGCGCATTGGTTCAAGAATTTCCTCAAAAAATCTTAG 1536 0.401 MAVLNFNMFLLLSLLSIIINITRIDAIIEPTHLLNRSSFPPDFVFGTASSAYQYEGAAREGGKGPSNWDTFTHKYPEKIKDGSNGDVADDSYNRYKDDIGIMKYMNMDAYRFSISWSRVLPKGKLSAGVNHEGINYYNNLIDELLANGLQPYVTIFHWDLPQALEDEYGGFLSPRIVEDFRDYAELCFKKFGDRVKHWITLNEPRSVSKNGYANGRFAPGRCSDWLKMNCTGGDSGTEPYLTSHYQLLAHAAAAKLYKTKYQASQNGLIGITLNSDWYVPISKEMSDRDAAQRALDFMFGWYMEPLTKGEYPKSMRAMVGSRLPKFSNEESEQLKGSFDFLGLNYYSSFYAAHAPYLRDARPALQTDSLVKFTNQHDGKPLGPMAASNWLCIYPRGFRQLLLFIKKQYNNPVIYITENGYDEFNDPTLSLEESLIDTYRIDYFYRHLYYLQTAIRDGVNVKGYFAWSLLDNLEWDSGYTVRFGLVFVDFKDDLKRYPKLSAHWFKNFLKKS 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03667 511 Pfam Glycosyl hydrolase family 1 37 510 IPR001360 GO:0004553|GO:0005975
Car06g03667 511 SUPERFAMILY (Trans)glycosidases 30 509 IPR017853 -
Car06g03667 511 PRINTS Glycosyl hydrolase family 1 signature 337 351 IPR001360 GO:0004553|GO:0005975
Car06g03667 511 PRINTS Glycosyl hydrolase family 1 signature 413 421 IPR001360 GO:0004553|GO:0005975
Car06g03667 511 PRINTS Glycosyl hydrolase family 1 signature 436 447 IPR001360 GO:0004553|GO:0005975
Car06g03667 511 PRINTS Glycosyl hydrolase family 1 signature 457 474 IPR001360 GO:0004553|GO:0005975
Car06g03667 511 PRINTS Glycosyl hydrolase family 1 signature 481 493 IPR001360 GO:0004553|GO:0005975
Car06g03667 511 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 43 57 IPR033132 -
Car06g03667 511 PANTHER BETA-GLUCOSIDASE, PUTATIVE-RELATED 23 510 - -
Car06g03667 511 PANTHER GLYCOSYL HYDROLASE 23 510 IPR001360 GO:0004553|GO:0005975
Car06g03667 511 Gene3D Glycosidases 24 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03667 Car-Chr6 68078868 68083314 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03667 12 510 Glycoside Hydrolase AT5G44640 54.473 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03667 - K01188 gmx:100801874 905.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03667 06 68078868 68083314 Car06g03667 06 68078868 68083314 ECH
Car06g03667 06 68078868 68083314 Car01g02644 01 52049114 52055150 ECH