Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03606 ATGGAAAACGGCCATAAGTTCCAGGAAGTTTCCAAGCCTAAATATGATTGTCTATTGTTTGATGTTGATGATACCCTTTATCCTCTGAGTTCTGGAATATCAGCGAATACAGCAAAAAATATTGAAGAGTATATGCTTCAAAAGCTTGGAATGGAGGCTGCTACAGTTCCTGAATTGTGCTATTCATTATACAAGACTTATGGGACAACAATGGCTGGTCTTAGGGCAATTGGCTATGACTTTAACTACAATGACTTCCATAGTTTTGTTCATGGGAGATTGCCATATAATTTACTGAAACCGGACCCCATTCTCAGGGGCATTTTGCTAAGTCTGCCTATTAGGAAAGTGGTTTTTACCAATGCGGACACGGGGCATGCAATTAGGGTGCTTCAAAGGCTTGGACTGGAGGACTGTTTTGAAAGAATAATAAGCTTTGATACTCTGAATTCCGTTGACAATCCTCCTAATGACAAAGATGGCAGTGCAATTTTCGATTTCTGTAAGTACACACGCCAGCCTGATTCTGATATGGTGCTTCCAAAGACACCTGTTGTATGCAAACCCTTTGAAGATGCATTTGAAAAGGCTTTCAAGTTGGCTGACATTGACCCTCAAAGAACATTGTTCTTTGATGACAGTCTCCGCAATTTACTGACAGCTAAACGTTTAGGCCTCCATACAGTTGCGGTGGGTACATCTGTGCGTAGTACAGGTGTGGATCATGCATTAGCGAGTATCCATAATATCAGAGAGGCATTTCCAGAGCTATGGGAAGCCGATGAGAAGCATGAAGTTGTGAACTATAAGGTTGCAATTGAAACATCAGTAGAAGCATAG 840 0.4131 MENGHKFQEVSKPKYDCLLFDVDDTLYPLSSGISANTAKNIEEYMLQKLGMEAATVPELCYSLYKTYGTTMAGLRAIGYDFNYNDFHSFVHGRLPYNLLKPDPILRGILLSLPIRKVVFTNADTGHAIRVLQRLGLEDCFERIISFDTLNSVDNPPNDKDGSAIFDFCKYTRQPDSDMVLPKTPVVCKPFEDAFEKAFKLADIDPQRTLFFDDSLRNLLTAKRLGLHTVAVGTSVRSTGVDHALASIHNIREAFPELWEADEKHEVVNYKVAIETSVEA 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03606 279 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 279 - -
Car06g03606 279 SUPERFAMILY HAD-like 15 252 IPR036412 -
Car06g03606 279 Gene3D - 104 266 IPR023214 -
Car06g03606 279 SFLD C1.5.3: 5'-Nucleotidase Like 11 260 IPR010237 -
Car06g03606 279 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 183 231 IPR006439 -
Car06g03606 279 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 11 260 - -
Car06g03606 279 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 16 230 IPR010237 -
Car06g03606 279 Gene3D - 5 99 - -
Car06g03606 279 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03606 Car-Chr6 67371783 67374126 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03606 K07025 - gmx:100807717 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03606 06 67371783 67374126 Car06g03606 06 67371783 67374126 ECH
Car01g02595 01 51623272 51625592 Car06g03606 06 67371783 67374126 PCT