Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02595 ATGGAAAACGGGGATCAGTTCCAGGAATCAAAGGCTAAATATGATTGTCTTTTATTTGATCTTGATGATACACTTTATCCTTTAAGTTCTGGGTTGTCAGGGCACGTGACCAAAAATATTCAAGagtacatGCTTCAAAAGCTTGGGATACAAGAGGATCAAGTTCCTGAATTATGTGTTTCATTATATAAGACTTATGGGACAACGATGGCAGGTCTCAAGGCAATTGGCTATGACTTTGACTATGATGACTTTCATGGCTTTGTTCATGGGAAATTGCCATATAATATGCTAAAACCTGACCCTGTTCTCAGAGGAATTTTGCTAAGTCTACCCCTTCCAAAAATTGTTTTTACAAACTCAGATGAGGCACATGCTAATAGAGTGCTACAAAGGCTTGGATTGGAAGATTGTTTTGAAAGAATCATAAGCTTTGAGACTCTAAATTCCTTCAAATCCAATATAGATGGCAGTGAATATAAACAAAGTTCCAAAGGAATTTTTGATTTTTATGAGTACATTTCTAGGCCTAATGTTGATACTGTGCTACCAAGGACCCCTGTTATCTGTAAACCATTTCAAGATGCATTTGATAATGTTTTTAAGATGACAAATATTGAACCTCAAAGAACATTGTTCTTTGATGACAGTATCCGCAATATACAGACAGGCAAATCCTTGGGCCTTAACACTGTCTTGGTGGGTACTTCCCAAAGAACAAAAGGAGTGGATTATGCTTTGGAGAGCATCCATAATATAAAAGAGGCATTTCCAGAACTATGGGAAGGTGATGAGAAGACTAAAAGTGTCAAGTATTCTACAAAGGTTGCAATTGAAACATCGGTTATAGCTTAA 855 0.3649 MENGDQFQESKAKYDCLLFDLDDTLYPLSSGLSGHVTKNIQEYMLQKLGIQEDQVPELCVSLYKTYGTTMAGLKAIGYDFDYDDFHGFVHGKLPYNMLKPDPVLRGILLSLPLPKIVFTNSDEAHANRVLQRLGLEDCFERIISFETLNSFKSNIDGSEYKQSSKGIFDFYEYISRPNVDTVLPRTPVICKPFQDAFDNVFKMTNIEPQRTLFFDDSIRNIQTGKSLGLNTVLVGTSQRTKGVDYALESIHNIKEAFPELWEGDEKTKSVKYSTKVAIETSVIA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02595 284 Gene3D - 106 269 IPR023214 -
Car01g02595 284 SFLD C1.5.3: 5'-Nucleotidase Like 9 263 IPR010237 -
Car01g02595 284 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 9 263 - -
Car01g02595 284 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 186 234 IPR006439 -
Car01g02595 284 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 284 - -
Car01g02595 284 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 15 234 IPR010237 -
Car01g02595 284 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 284 - -
Car01g02595 284 Gene3D - 6 98 - -
Car01g02595 284 CDD HAD_5NT 16 236 IPR010237 -
Car01g02595 284 SUPERFAMILY HAD-like 16 238 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02595 Car-Chr1 51623272 51625592 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02595 K07025 - gmx:100790444 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02595 01 51623272 51625592 Car01g02595 01 51623272 51625592 ECH
Car01g02595 01 51623272 51625592 Car06g03606 06 67371783 67374126 PCT