Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03575 ATGGCAGCGAATTCTTCTAATGGAGATCACCAAACAACACATAAGCAACCTCCTTTGCCATCTCCCCTGCGTTTCTCCAAATTCTTTCAGTCTAACATGAGAATCTTGGTTACTGGAGGAGCTGGATTCATTGGTTCTCACCTAGTTGATAGATTGATGGAAAATGAAAAAAATGAGGTCATTGTTGCGGATAACTACTTCACTGGATCAAAGGACAACCTCAAAAAATGGATTGGTCATCCAAGATTTGAGCTTATCCGTCATGATGTCACTGAGCCTCTGATGATTGAGGTTGATCAGATCTACCATCTGGCATGCCCCGCATCTCCTATTTTTTACAAATATAATCCTGTAAAGACAATAAAGACTAATGTTATTGGCACTCTGAACATGCTTGGACTTGCAAAACGAGTTGGAGCAAGGATTTTGCTTACTTCCACTTCGGAGGTATATGGAGATCCTCTTGAGCATCCCCAAACTGAAAGCTATTGGGGCAATGTTAACCCTATTGGAGTTCGTAGCTGCTATGACGAGGGGAAACGTGTGGCTGAGACTTTGATGTTTGATTATCATAGGCAGCACGGAATAGAAATACGTGTTGCAAGAATCTTTAACACATATGGACCACGCATGAATATTGATGATGGACGTGTTGTCAGCAACTTCATTGCTCAAGCACTGCGTGGTGAATCCTTGACTGTCCAATCTCCAGGAACACAAACTCGCAGTTTCTGCTATGTCTCTGACCTGGTTGACGGTCTTATCCGTCTCATGGGAGGATCTGACACTGGTCCAATCAATCTTGGAAACCCAGGTGAATTCACAATGCTTGAACTTGCTGAGACAGTGAAGGAGCTTATTAATCCAAATGTGGAGATAAAGACTGTGGAAAACACTCCTGATGATCCAAGACAGAGAAAACCAGACATAACAAAAGCAAAGGAATTGCTTGGATGGGAACCAAAGGTCAAGCTGAGGGATGGTCTTCCTCTTATGGAAGGAGATTTCCGTTTGAGGCTTGGGGTTGACAAGAAAAATTAA 1041 0.4275 MAANSSNGDHQTTHKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLMIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQALRGESLTVQSPGTQTRSFCYVSDLVDGLIRLMGGSDTGPINLGNPGEFTMLELAETVKELINPNVEIKTVENTPDDPRQRKPDITKAKELLGWEPKVKLRDGLPLMEGDFRLRLGVDKKN 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03575 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 28 334 IPR036291 -
Car06g03575 346 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 346 IPR044516 GO:0042732|GO:0048040|GO:0070403
Car06g03575 346 Gene3D - 32 336 - -
Car06g03575 346 MobiDBLite consensus disorder prediction 1 22 - -
Car06g03575 346 CDD UGD_SDR_e 33 337 - -
Car06g03575 346 Pfam GDP-mannose 4,6 dehydratase 36 330 IPR016040 -
Car06g03575 346 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03575 Car-Chr6 66972130 66975734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03575 30 329 Miscellaneous Gene Families AT1G02000 23.881 9.92e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03575 K08678 - qsu:112026144 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03575 06 66972130 66975734 Car06g03575 06 66972130 66975734 ECH
Car06g03575 06 66972130 66975734 Car01g02569 01 51402962 51407581 ECH
Car06g03575 06 66972130 66975734 Car01g02569 01 51402962 51407581 PCT