Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02569 ATGGCAACTAATTCTTCTAATGGAGaacaacaagcagcagcaacaaccacaacaaagcaacCTCCCTTGCCATCTCCTTTGCGATTTTCAAAATTCTTTCAGTCCAATATGAGAATTTTGGTCACTGGAGGAGCTGGTTTTATTGGTTCTCACCTAGTTGACAGATTGATGGAAAATGAGAAAAATGAGGTAATTGTTGCTGATAACTTCTTCACTGGATCTAAAGACAACCTTAGAAAATGGATTGGTCATCCAAGATTTGAGCTGATTCGTCATGTAGATGTGACAGAGCAACTGTTGGTTGAGGTTGATCAGATCTACCATCTTGCATGCCCTGCTTCTCCGATTTTCTACAAATACAATCCTGTAAAGACAATTAAGACAAATGTAATTGGAACACTGAACATGCTTGGGCTTGCAAAGCGGGTTGGAGCAAGGATTTTGCTTACATCTACTTCAGAAGTATATGGAGACCCTCTTGTGCATCCACAACCAGAATCCTATTGGGGAAATGTCAATCCTATTGGGGTTCGAAGTTGCTATGATGAGGGCAAGCGTGTGGCAGAAACTTTGATGTTTGACTATCATAGGCAGCACGGAATTGAAATTCGCATTGCCAGAATCTTCAACACATATGGACCACGCATGAATATTGATGATGGGCGTGTCGTCAGCAACTTTATTGCTCAAGCAATTCGTGGTGAAGCCCTAACAGTCCAACTTCCAGGAACACAAACTCGCAGTTTCTGCTATGTCTCTGACATGGTTGATGGCCTTATCCGTCTCATGGAAGGAGAAAACACTGGTCCAATCAACATTGGGAACCCAGGCGAGTTTACTATGACTGAACTTGCTGAGAATGTGAAGGAGCTTATTAATCCAGCTGTGGAGATAAAGATGGTAGAGAACACACCGGACGATCCTCGGCAAAGAAAACCAGACATAACAAAAGCAACAGAATTGCTTGGTTGGGAACCAAAGGTCAAGTTGCGGGACGGTCTTCCTCTTATGGAAGAGGATTTCCGTCTTAGGCTTGAGGTTCCGAAAAAGAAGTAA 1056 0.4138 MATNSSNGEQQAAATTTTKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNFFTGSKDNLRKWIGHPRFELIRHVDVTEQLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEALTVQLPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMTELAENVKELINPAVEIKMVENTPDDPRQRKPDITKATELLGWEPKVKLRDGLPLMEEDFRLRLEVPKKK 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02569 351 MobiDBLite consensus disorder prediction 1 25 - -
Car01g02569 351 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 32 342 IPR036291 -
Car01g02569 351 Gene3D - 163 347 - -
Car01g02569 351 Gene3D - 34 162 - -
Car01g02569 351 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 350 - -
Car01g02569 351 CDD UGD_SDR_e 37 342 - -
Car01g02569 351 Pfam GDP-mannose 4,6 dehydratase 40 335 IPR016040 -
Car01g02569 351 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 350 IPR044516 GO:0042732|GO:0048040|GO:0070403
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02569 Car-Chr1 51402962 51407581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02569 1 334 Miscellaneous Gene Families AT4G00110 23.514 2.34e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02569 K08678 - gmx:100819843 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02569 01 51402962 51407581 Car01g02569 01 51402962 51407581 ECH
Car06g03575 06 66972130 66975734 Car01g02569 01 51402962 51407581 ECH
Car01g02569 01 51402962 51407581 Car06g03403 06 63855338 63858441 PCT
Car06g03575 06 66972130 66975734 Car01g02569 01 51402962 51407581 PCT