Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03546 ATGGAGTTCCTTTTTTTATTTTACATAGTTCCAACATTGTACTTATGTTTCCTAATTTGGAAGTTATTTGATAAAAAGAAGGACCAAGAGTGTTACATATTAGATTACCAATGCTATAAGCCAACACAAGATAGAATGCTAGGGACAGAGTTTTGTGGCAAACTAATCAAAAGAACTGAGAATTTGGGTCTAGATGAGTACAAATTTCTCCTTAAAGCCATTGTAAGTTCCGGCATCGGCGAACAAACTTATGCGCCAAGAAACATCTTCGAAGGCCGCGAAGCGTCCGCAACACTGGCAGACGGAATCTCCGAAATGGAAGAGTTTTTCAACGACAGCATCGAAAAACTCCTATTGAGGTCGTCGATTCCTCCTTCAGAAATCGACGTCCTCGTTGTCAACATCTCAATGTTCGCGACGCTTCCTTCCCTGTCGTCGCGGATTATCAACCGTTACAAAATGCGAGATGACATAAAAGTTTACAACTTAACAGCAATGGGGTGTAGTGCTAGTCTTATATCACTAGACATTATTAAAAACATTTTCAAAACACAAAGTAACAAGTTAGCACTTTTGGTAACATCAGAATCACTTTGTCCAAATTGGTATCAAGGTAATGAAAGATCAATGATCTTAACCAATTGTATCTTCCGTTCTGGTGGTTGTGCAATTCTCTTGACAAACAAAAGATCCTTAAAGAACAAAGTCATGTTGAAATTGAAGTGTTTGGTTAGAACACATCATGGTGCAAAAGATGATTCTTTTACTTGTTGTATTCAAAAGGAAGATGAAAAGGGTAGAATTGGTGTTCATCTTAGTAAATCTCTACCAAAAGCAGCTACAAGAGCATTTGTTGACAATTTAAGGGTAATTTCACCTAAAATTTTGCCAACAAAGGAATTGTTAAGGTTTCTTGTAGTGACCCTTTTCAAAAAATTTAGTATTTCTAGTTCTAGTTCTTCTAAAACTTCTAGTGGAGGAAAAACAAGTACAAAATCACCAATAAATCTCAAAACTGGTGTTGATCATTTTTGCATTCATACAGGAGGAAAAGCAGTGATAGATGGAATTGGATTAAGCTTAGATCTAAATGAATATGATCTTGAGCCAGCTAGGATGACACTAAACCGTTTTGGAAACACCTCAGCTAGTAGTTTGTGGTATGTGTTAGGGTACATGGAAGCAAAGAAGAGACTCAAAAAGGGTGATAAAATTTTCATGATTAGTTTTGGTGCTGGATTTAAATGCAATAGTTGTTTGTGGGAAGTAGTCAAAGATCTTGGAGATGGAAATGTTTGGGAAGATTGTATTCATGATTATCCACTTGACTCTTTGGTCAATCCTTTCATGGAGAAGTATAGTTGGCTTAATGAAGTTGAGGATCCAAACAATTATGAAATTCCTGATTTTCTCAAGTGA 1419 0.3636 MEFLFLFYIVPTLYLCFLIWKLFDKKKDQECYILDYQCYKPTQDRMLGTEFCGKLIKRTENLGLDEYKFLLKAIVSSGIGEQTYAPRNIFEGREASATLADGISEMEEFFNDSIEKLLLRSSIPPSEIDVLVVNISMFATLPSLSSRIINRYKMRDDIKVYNLTAMGCSASLISLDIIKNIFKTQSNKLALLVTSESLCPNWYQGNERSMILTNCIFRSGGCAILLTNKRSLKNKVMLKLKCLVRTHHGAKDDSFTCCIQKEDEKGRIGVHLSKSLPKAATRAFVDNLRVISPKILPTKELLRFLVVTLFKKFSISSSSSSKTSSGGKTSTKSPINLKTGVDHFCIHTGGKAVIDGIGLSLDLNEYDLEPARMTLNRFGNTSASSLWYVLGYMEAKKRLKKGDKIFMISFGAGFKCNSCLWEVVKDLGDGNVWEDCIHDYPLDSLVNPFMEKYSWLNEVEDPNNYEIPDFLK 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03546 472 Gene3D - 70 423 IPR016039 GO:0016746
Car06g03546 472 SUPERFAMILY Thiolase-like 28 424 IPR016039 GO:0016746
Car06g03546 472 Pfam FAE1/Type III polyketide synthase-like protein 25 312 IPR013601 GO:0006633|GO:0016020|GO:0016747
Car06g03546 472 PANTHER 3-KETOACYL-COA SYNTHASE 1 462 - -
Car06g03546 472 CDD CHS_like 31 421 - -
Car06g03546 472 PIRSF Very_long_ch_3-ktacl-CoA_syn 2 455 IPR012392 GO:0006633|GO:0016020|GO:0016747
Car06g03546 472 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 341 422 IPR013747 -
Car06g03546 472 PANTHER 3-KETOACYL-COA SYNTHASE 1 462 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03546 Car-Chr6 66697456 66699254 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03546 14 469 Acyl Lipid Metabolism Gene Families AT1G07720 70.563 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03546 K15397 - gmx:100809149 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03546 06 66697456 66699254 Car06g03546 06 66697456 66699254 ECH
Car06g03546 06 66697456 66699254 Car01g02552 01 51241491 51243761 ECH
Car01g02552 01 51241491 51243761 Car06g03546 06 66697456 66699254 PCT