Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03513 ATGACAAAAAACATAACCACCCTTTTGCTCTTGCTTCTTGTTGGAGTAACCATAACATTGTGTGAAGATGAAGAAAGGGAAAAAGGTTCATCATCATCAAACAAATTGTTCTTGATGCAAGACTCCAAGAGTGTGGTTAAAACTGATGCAGGGGAAATGCGGTTATTTCAAAACAAAGATACTGAGTTTTTGGATAGGAACATGCACATTGGTTTAATTAATATGGAACCAAGGTCCTTGTTCATTCCTCAATATTTGGACTCCAATTTTATTATATTCGTCCGTAGAGGGGATGCAAAGTTGGGATTCATATATGGTGATGAACTAGAGGAGAGACGATTGAAGACAGGGGACATATATGTAATTCCAGCAGGTTCTGTATTCTATTTGGTTAATATAGGTGAAGGTCAGAGACTTCATCTCATTTGCAGCATTGATCCTTCTACAAGCTTAGGAGATACTTTTCAGCCTTTCTATATTGGTGGAGGAGATAATTCACAATCAGTGCTTGCTGGATTTGAGCCTGTTATTCTTGAAACTGCATTTAATGAATCAAGAGAAAAGCTAGAGAGAATCTTCAGCAAGAAAGTAGATGGGCCAATTGTGTACATTGATGATTCTCATGCACCTAGTCTTTGGACCAAATTCCTTCAACTAAAGAAGGAAGAAAAAGTACAACACCTTAACAAAATGGTACAAGGCCAAGAAGAAAACAATGAAGAGAAGAAGCAAACAAGTTGGTCATGGAGGAAGCTATTTCAAAGTGTATTAGGAGAAGAGAATAAAAATATAGAGAACAAAGACAGAGGTGATTCCCCTGACTCATACAACCTCTATGACAGAAAACATGACTTCAAAAATGGTTATGGTTGGAGCAGTGCATTGGATGGAGATGATTATTCTCTTCTCAAAATACCTGACATTGGTGTTTTTCATGTGAATCTCACTGCGGGATCCATGATGGTACCTCATGTGAATCCAAGGGCAACAGAATATGGAATAGTATTAAGAGGCAGTGGAAGAATTCAGATACTATTTCCAAATGGAAGCAATGCAATGGACACAGAAATAAAAGTAGGTGACATATTCTATGTACCAAGATACTTTCCATTCTGTCAAATAGCATCAAGAAATGGAGCCTTAGAGTTCTTTGGGTTCACAACCTCATCAAAAAAGAGCAATCCACAGTTTCTAGTAGGTGCTGCATCACTTCTAAAGACCATAATGGGACCTGAACTTGCAGCTGGATTTGGAGTGAGAGAAGACATTATGAGAGATGTTGTTGGTGCTCAACATGATGCTGTCATAGTTTCTTCAACATGGGCTGCACCTGGAACTGGAGGGtggtggtcattgaagaatcaaaggattttgataagatga 1383 0.3745 MTKNITTLLLLLLVGVTITLCEDEEREKGSSSSNKLFLMQDSKSVVKTDAGEMRLFQNKDTEFLDRNMHIGLINMEPRSLFIPQYLDSNFIIFVRRGDAKLGFIYGDELEERRLKTGDIYVIPAGSVFYLVNIGEGQRLHLICSIDPSTSLGDTFQPFYIGGGDNSQSVLAGFEPVILETAFNESREKLERIFSKKVDGPIVYIDDSHAPSLWTKFLQLKKEEKVQHLNKMVQGQEENNEEKKQTSWSWRKLFQSVLGEENKNIENKDRGDSPDSYNLYDRKHDFKNGYGWSSALDGDDYSLLKIPDIGVFHVNLTAGSMMVPHVNPRATEYGIVLRGSGRIQILFPNGSNAMDTEIKVGDIFYVPRYFPFCQIASRNGALEFFGFTTSSKKSNPQFLVGAASLLKTIMGPELAAGFGVREDIMRDVVGAQHDAVIVSSTWAAPGTGGWWSLKNQRILIR 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03513 460 CDD cupin_7S_vicilin-like_N 45 212 - -
Car06g03513 460 SMART Cupin_1_3 37 190 IPR006045 -
Car06g03513 460 SMART Cupin_1_3 276 425 IPR006045 -
Car06g03513 460 Gene3D Jelly Rolls 25 218 IPR014710 -
Car06g03513 460 SUPERFAMILY RmlC-like cupins 39 434 IPR011051 -
Car06g03513 460 PANTHER OS03G0336100 PROTEIN 4 446 - -
Car06g03513 460 Coils Coil 225 245 - -
Car06g03513 460 Pfam Cupin 276 421 IPR006045 -
Car06g03513 460 Pfam Cupin 42 143 IPR006045 -
Car06g03513 460 Gene3D Jelly Rolls 280 441 IPR014710 -
Car06g03513 460 PANTHER OS03G0336100 PROTEIN-RELATED 4 446 - -
Car06g03513 460 CDD cupin_7S_vicilin-like_C 284 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03513 Car-Chr6 66076899 66080236 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03513 31 445 Miscellaneous Gene Families AT2G18540 30.394 9.05e-42 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03513 - - gmx:547942 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03513 06 66076899 66080236 Car06g03513 06 66076899 66080236 ECH
Car01g02477 01 50506792 50510079 Car06g03513 06 66076899 66080236 PCT