Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03482 ATGCGTAAGCCCGGCCCGGAAATGCAAGGACGAGAGCGTGGCTTGAGTCTGAACGCACCAACCGATCAGACTCACCACTGCAATCAGCGACTGTCAGTAGTGAGAGAAACCGATGTAGAGGTAGAAGCACCTGTCGAATCCGGTTCAGATGTCGCGTGGGAGAGAACCGGTTCGGAACACGAAATTGATCAACCTTCAAGCCCTAGTAGTAGCGGTTACGCTGGCGAAGGAGGTAGCACTAGTGCCACAAGTGCTTCTTCCTTAATCGAGATCCAGCGCGATGAAATTGAGGAACAAATGAGAATTCATATCGATGAAATCTCAATTTCCGATTCCAATGCTTCCTGGATTCCCGGTAAACGACACCAAGATGAAGATGATGCTTCAATATCGTGGAGAAAAAGGAAGAAGCATTTCTTTATTCTCAGCAATTCTGGAAAACCTATATATTCTAGGTATGGAGATGAACACAAGCTTGCAGGGTTTTCAGCAACTTTGCAAGCAATCATTTCCTTTGTTGAGAACGGGGGTGATTCTGTCAAATTGGTGAGGGCTGGAAAGCATCAGGTGGTTTTTCTTGTGAAAGGACCAATTTACTTGGTCTGCATCAGCTCCACAGAAGAACCGTATGAGTCATTAAAGGGGCAGTTGGAATTAATATATGGCCAGATGCTTGTTATATTAACAAGATCAGTAAATAAATGTTTTGAGAAGAATCCGAAGTTCGATATGACACCCTTACTTGGTGGAACAGACACCATCTTCTCTTCTCTAATCCACTCTTTCAGTTGGAACCCAGCTACATTTCTGCATGCTTATACTTGCCTTCCTCTTTCTTATGCAACAAGGCAAGCTGCAGGTGCTGTCTTGCAAGACATTGCTGATTCAGGTGTTTTGTTTGCAACACTAATGTGCAGGCACAAGGTGATCAGTCTTGTTGGCGCTCAGAAAGCTTCCCTTCATCCAGATGACATGCTGCTGCTGGCCAACTTTGTTATGTCATCAGAATCCTTCAGGACGTCAGAATCGTTTTCTCCAGTTTGCTTGCCAAGATATAATCCTTCAGCGTTTTTGTATGCTTATATCCATTATTTTGATGCTGACACATACTTGATGTTGCTAACGACTAATTCAGATGCATTTTATCATCTGAAGGATTGCCGGATTCGTATTGAAATGGTCCTTTTGAAGTCAAACGTCCTTAGTgaagttcaaagatccttgctagatggaggaatgcatgttgaggatctaccaccaatacctcatTCAGGCCCATCTCATTTGGGCCAGCACATTCCTCCATCAGATTCTCCTGAAAGATTTAAGGAAGCTAATCATGACACTGGGGGTCCTGCTGGGTTGTGGCATTTCATATACCGCAGTATATACCTGGATCAATATGTCTCGTCAGAGTTTTCATCATCAATTAGTACTCGTCAACAGCAGAAAAGACTGTATAGAGCTTACCAGAAACTTTTTGCATCAATGCATGATAAAGGAATCGGACCACACAAAACTCAATTTAGAAGGGATGAAAACTATGTTCTTTTATGTTGGGTGACTCAGGATTTTGAACTTTATGCTGCTTTTGATCCCCTTGCAGACAAGGCCTTGGCAATAAAGACATGCAACCGTGTTTGTCAATGGATAAAAGATGTGGAAAATGAAATATTTTTGCTAGGAGCCAGCCCTTTTTCATGGTGA 1707 0.4136 MRKPGPEMQGRERGLSLNAPTDQTHHCNQRLSVVRETDVEVEAPVESGSDVAWERTGSEHEIDQPSSPSSSGYAGEGGSTSATSASSLIEIQRDEIEEQMRIHIDEISISDSNASWIPGKRHQDEDDASISWRKRKKHFFILSNSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDSVKLVRAGKHQVVFLVKGPIYLVCISSTEEPYESLKGQLELIYGQMLVILTRSVNKCFEKNPKFDMTPLLGGTDTIFSSLIHSFSWNPATFLHAYTCLPLSYATRQAAGAVLQDIADSGVLFATLMCRHKVISLVGAQKASLHPDDMLLLANFVMSSESFRTSESFSPVCLPRYNPSAFLYAYIHYFDADTYLMLLTTNSDAFYHLKDCRIRIEMVLLKSNVLSEVQRSLLDGGMHVEDLPPIPHSGPSHLGQHIPPSDSPERFKEANHDTGGPAGLWHFIYRSIYLDQYVSSEFSSSISTRQQQKRLYRAYQKLFASMHDKGIGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKALAIKTCNRVCQWIKDVENEIFLLGASPFSW 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03482 568 Pfam First Longin domain of FUZ, MON1 and HPS1 137 258 IPR043972 GO:0016192
Car06g03482 568 MobiDBLite consensus disorder prediction 425 445 - -
Car06g03482 568 MobiDBLite consensus disorder prediction 1 85 - -
Car06g03482 568 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 546 566 IPR004353 GO:0006623
Car06g03482 568 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 155 175 IPR004353 GO:0006623
Car06g03482 568 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 189 203 IPR004353 GO:0006623
Car06g03482 568 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 240 252 IPR004353 GO:0006623
Car06g03482 568 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 293 306 IPR004353 GO:0006623
Car06g03482 568 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 533 546 IPR004353 GO:0006623
Car06g03482 568 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 269 290 IPR004353 GO:0006623
Car06g03482 568 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 317 333 IPR004353 GO:0006623
Car06g03482 568 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 517 531 IPR004353 GO:0006623
Car06g03482 568 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 342 365 IPR004353 GO:0006623
Car06g03482 568 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 370 396 IPR004353 GO:0006623
Car06g03482 568 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 137 154 IPR004353 GO:0006623
Car06g03482 568 Pfam Third Longin domain of FUZ, MON1 and HPS1 454 555 IPR043970 GO:0016192
Car06g03482 568 MobiDBLite consensus disorder prediction 62 85 - -
Car06g03482 568 Pfam Second Longin domain of FUZ, MON1 and HPS1 298 389 IPR043971 GO:0016192
Car06g03482 568 PANTHER BNAC04G15860D PROTEIN 58 568 - -
Car06g03482 568 PANTHER SAND PROTEIN-RELATED 58 568 IPR004353 GO:0006623
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03482 Car-Chr6 65629871 65634567 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03482 K20195 - zju:107411372 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03482 06 65629871 65634567 Car06g03482 06 65629871 65634567 ECH
Car01g02500 01 50693236 50697947 Car06g03482 06 65629871 65634567 PCT