Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02500 ATGAATAAAGTGCAGGATGATGCTTCCATTTCATGGAGGAAAAGAAAGAAGCATTTTTTTGTTCTGAGTCATTCTGGCAAACCAATATACTCTAGGTATGGAGATGAACATAAGCTTGCTGGTTTTTCAGCAACTTTGCAAGCAATCATTTCGTTTGTTGAAAATGGGGGTGACCGTGTCAAATTGGTGAGGGCTGGAAAGCATCAGGTGGTTTTTCTCGTGAAAGGACCAATTTACTTAGTCTGCATCAGCTGCACCGAAGAGCCTTATGAGTCCTTACGGAGGCAATTAGATCTCATTTATGGCCAGATGATTGTCATACTGACAAAATCAGTAAACAGATGCTTTGAGAAGAATCCAAAGTTTGATATGACATCCTTGCTTGGTGGAACAGACACTGTCTTCTCTTCACTAATCCACTCTTTTTGTTGGAACCCAGCTACATTTCTTCATGCCTATACTTGTCTGCCTCTTGCATGTGCAACAAGACAAGCTGCTGGTGCCATCTTGCAAGATGTAGCTGATTCCGGTGTTCTGTTTGCAATACTGATGTGCAGACACAAGGTAATCAGTCTATTTGGTGCTCAGAAAGCCTCTCTTCATCCAGATGATATGCTGCTACTGGCCAACTTTGTTATGTCATCAGAATCCTTTAGGACCTCGGAGGCATTTTCTCCTGTTTGCTTGCCAAGATACAATCCTTTGGCATTTTTGTATGCTTATATCCATTATTTTGATGATGACACATACTTGATGTTGCTGACAACTAGTTCTGATGCATTTTACCATCTTAAGGATTGCAGGATTCGTATTGAGACGGTCCTTTTGAAGTCAAATGTCCTCGATGAAGTTAAGAGATCCTTGTTTGATGGTGGAATGCACATTGAGGATCTGCCACCCTTATCTCATTCTGGATCCTCTCCTCATTTGGGCCAGCATAGTCTTCGACTAGATTCTCCTGAAAGATTGAGAGAATCTAATTCTAGTGCAGGTGGTGCTGCGGGTTTGTGGCATTTCATATATCGCAGCTTATATCTGGATCAGTATGTATCTTCAGAGTTCTCATCACCAATTAATACTCATCAGCAGCAGAAAAGACTGTATAGAGCTTACCAGAAACTTTTTGCATCCATGCATGAGAAAGGAATTGGGCCACACAAAACTCAGTTTAAAAGGGATGAAAACTATGTTCTGCTTTGTTGGGTAACGCAGGACTTTGAACTTTATGCTGCATTTGATCCCCTTGCAGACAAGGCCTCGGCAATAAAGACGTGCAACCGGGTATGTCAATGGGTAAAAGATGTGGAAAGTGAAATATTTTTGCTAGGAGGTAGCCCCTTTTCATGGTGA 1350 0.4163 MNKVQDDASISWRKRKKHFFVLSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDRVKLVRAGKHQVVFLVKGPIYLVCISCTEEPYESLRRQLDLIYGQMIVILTKSVNRCFEKNPKFDMTSLLGGTDTVFSSLIHSFCWNPATFLHAYTCLPLACATRQAAGAILQDVADSGVLFAILMCRHKVISLFGAQKASLHPDDMLLLANFVMSSESFRTSEAFSPVCLPRYNPLAFLYAYIHYFDDDTYLMLLTTSSDAFYHLKDCRIRIETVLLKSNVLDEVKRSLFDGGMHIEDLPPLSHSGSSPHLGQHSLRLDSPERLRESNSSAGGAAGLWHFIYRSLYLDQYVSSEFSSPINTHQQQKRLYRAYQKLFASMHEKGIGPHKTQFKRDENYVLLCWVTQDFELYAAFDPLADKASAIKTCNRVCQWVKDVESEIFLLGGSPFSW 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02500 449 Pfam Second Longin domain of FUZ, MON1 and HPS1 178 269 IPR043971 GO:0016192
Car01g02500 449 PANTHER BNAC04G15860D PROTEIN 5 449 - -
Car01g02500 449 PANTHER SAND PROTEIN-RELATED 5 449 IPR004353 GO:0006623
Car01g02500 449 Pfam Third Longin domain of FUZ, MON1 and HPS1 335 435 IPR043970 GO:0016192
Car01g02500 449 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 197 213 IPR004353 GO:0006623
Car01g02500 449 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 427 447 IPR004353 GO:0006623
Car01g02500 449 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 17 34 IPR004353 GO:0006623
Car01g02500 449 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 69 83 IPR004353 GO:0006623
Car01g02500 449 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 120 132 IPR004353 GO:0006623
Car01g02500 449 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 173 186 IPR004353 GO:0006623
Car01g02500 449 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 398 412 IPR004353 GO:0006623
Car01g02500 449 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 414 427 IPR004353 GO:0006623
Car01g02500 449 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 222 245 IPR004353 GO:0006623
Car01g02500 449 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 149 170 IPR004353 GO:0006623
Car01g02500 449 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 250 276 IPR004353 GO:0006623
Car01g02500 449 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 35 55 IPR004353 GO:0006623
Car01g02500 449 Pfam First Longin domain of FUZ, MON1 and HPS1 17 138 IPR043972 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02500 Car-Chr1 50693236 50697947 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02500 K20195 - gmx:100814534 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02500 01 50693236 50697947 Car01g02500 01 50693236 50697947 ECH
Car01g02500 01 50693236 50697947 Car06g03482 06 65629871 65634567 PCT