LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car06g03481	atgtacaagaaCCAGCTTCAAGAGCTGGCACAAAGAAGCTGCTTCAACCTACCTTCGTACACGTGCATTCGGGAAGGTCCCGATCACGCGCCGAGGTTCAAAGCGACGGTTAACTTTAACGGCGAGATCTTTGAATGTCCTCAGTATTGCAATACACTTCGACAAGCGGAACATTCTGCTGCTGAGGTGGCACTCAATTCACTCTCACACCGTGGCCCTTCTCATTCCCTCGCCGCAAAAATCCTTGATGAGACGGGAGTGTACAAGAATCTCTTACAAGAAATTGCACAAAGGGTAGGGGCTCCACTGCCGCAGTATACAACTTTCAGGTCAGGGCTAGGACATCTACCTGTTTTTACCGGGACGGTAGAATTAGCTGGAATTACGTTTACTGGTGAACCTGCAAAGAATAAGAAACAAGCAGAGAAAAATGCAGCTATGGCAGCTTGGTCGTCTCTAAAGCAATTGGCGAAAGAAACTGCAAGCTCATCAACCGAACCGGAGAACAATGATGAACTAGAACAGATCACCATAGCTCGGGCCTTACTGAACTACCGTCTGAAAGAAAAAATGGCAATGTCAAATCCAAATGCTCCGATTCCATTTCCAATGAAGTTTCAATTTCAAAATCCGAGACCAACCAGTCCTCAACCTCGTCCAGCAACATCAAAAATACTTCCCCTGATTTGCCAAAGGACAGCACATCGAAGCAGGCACACCGCAACTGTAGCGTCCAGCAGTGACAATTCCATTATGCCACCATTTTCTTCTACACCTGAAATCCGATGGACCCGTCGCCCGAAATTCCCTGCAGCAGGAGCAGCACCTTATGTTCCCATTCGACATATGCGTTCACCTTGCCAGGGAATTGCACCTCCAGTGACTATTAGGACTGCAATACCTGTATTCTCCCCGCCACCGGCCGCTGTGTCCCCTCAAATAATACGGCCTCCTCCTGTACATGTTGCTTCTCCAATCAATATTCGGCAAGCAGTTCCAGTAAATGCTGCTCCACCGGTTCGACTAGATGAACCTGTTCCAATCAGCAAAGTCGATCCAGCACTATACGCTGCTCCACCCGTTCGAGTTGAAGAACCTGTTTCCATCAGCAAAGAAGGTCCAGCATCAGCTGTATATTCCACTCCACCTGTTCAAAAAGATGATCTTGTACCCAACGGCAAAGATGATTCAGCACCAGTAGTTGATACTACTCCACCATTTCAAAAAGACGAACCTATTGCCATCAGCAAAGATGATTCAGTGCCAACTACTGGTGCTCCTAATGAGAAAGATAAAACTGAGCACATTCAAGCAGAATCTGAGACAATGAAGAGCTTGGAGCAGCTGAAAATTTGA	1356	0.4683	MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCNTLRQAEHSAAEVALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFTGTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETASSSTEPENNDELEQITIARALLNYRLKEKMAMSNPNAPIPFPMKFQFQNPRPTSPQPRPATSKILPLICQRTAHRSRHTATVASSSDNSIMPPFSSTPEIRWTRRPKFPAAGAAPYVPIRHMRSPCQGIAPPVTIRTAIPVFSPPPAAVSPQIIRPPPVHVASPINIRQAVPVNAAPPVRLDEPVPISKVDPALYAAPPVRVEEPVSISKEGPASAVYSTPPVQKDDLVPNGKDDSAPVVDTTPPFQKDEPIAISKDDSVPTTGAPNEKDKTEHIQAESETMKSLEQLKI	451

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car06g03481	451	SMART	DRBM_3	88	154	IPR014720	-
	Car06g03481	451	SMART	DRBM_3	2	69	IPR014720	-
	Car06g03481	451	Gene3D	-	2	83	-	-
	Car06g03481	451	ProSiteProfiles	Double stranded RNA-binding domain (dsRBD) profile.	1	70	IPR014720	-
	Car06g03481	451	Gene3D	-	84	155	-	-
	Car06g03481	451	MobiDBLite	consensus disorder prediction	424	451	-	-
	Car06g03481	451	MobiDBLite	consensus disorder prediction	240	257	-	-
	Car06g03481	451	Pfam	Double-stranded RNA binding motif	2	68	IPR014720	-
	Car06g03481	451	Pfam	Double-stranded RNA binding motif	88	153	IPR014720	-
	Car06g03481	451	PANTHER	DOUBLE-STRANDED RNA-BINDING PROTEIN 2	1	451	-	-
	Car06g03481	451	MobiDBLite	consensus disorder prediction	240	259	-	-
	Car06g03481	451	CDD	DSRM_AtDRB-like_rpt2	86	154	IPR044451	GO:0003725
	Car06g03481	451	MobiDBLite	consensus disorder prediction	367	451	-	-
	Car06g03481	451	ProSiteProfiles	Double stranded RNA-binding domain (dsRBD) profile.	87	155	IPR014720	-
	Car06g03481	451	CDD	DSRM_AtDRB-like_rpt1	1	69	IPR044450	GO:0003725
	Car06g03481	451	PANTHER	-	1	451	-	-
	Car06g03481	451	SUPERFAMILY	dsRNA-binding domain-like	2	68	-	-
	Car06g03481	451	SUPERFAMILY	dsRNA-binding domain-like	88	158	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Car06g03481	Car-Chr6	65607471	65611422	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car06g03481	-		-	gmx:100816445	585.874

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Car06g03481	06	65607471	65611422	Car06g03481	06	65607471	65611422	ECH
	Car01g02501	01	50700919	50705969	Car06g03481	06	65607471	65611422	PCT