Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car06g03462 | ATGTTATGTGTATCAAATAGTTCAAGTCTTCTTCTATTCCTTTATGTACAATTTGATAAGAAGAAGGGGATGGTAGAGCAACAAGAGTGTGAGGGAAGAAAAGAGATGGAAGAGGAAATTGAGATGAAAGAATCAAAATTCAAGAGGATTTGTGTTTTTTGTGGTAGTAGTCCTGGTAACAAGAGTAGTTATAAAGATGCTGCTATTGAGCTTGGAAATGAATTGGTGTCAAGAAATATTGATCTTGTTTATGGAGGAGGCAGCATTGGATTAATGGGATTGGTATCTCAAGCTGTTTATGATGGAGGTGGTCATGTGATTGGGATTATTCCAAGGACATTGATGCCAAGAGAGATAACTGGAGAGACAGTGGGGGAAGTGAAGGCAGTAGCAGACATGCATCAAAGAAAAGCTGAGATGGCTAAGCATTCTGATGCATTTATTGCCTTACCCGGTGGATATGGGACCCTTGAGGAGCTTCTTGAGGTCATAACTTGGGCTCAACTTGGCATCCATGATAAACCTGCGGGGTTGTTGAACGTAGATGGCTACTACAATTTTTTGCTATCTTTTATTGACAAAGCTGTGGAGGAAGGTTTCATTTGCCCCAAAGCTCGTCATATAATTGTATCTGCTCCATCAACAAAAGAGCTTGTCAAAAAGATGGAGGAATATTCACCACAACACGAAAGAATTGCATCTAAGCTAAGCTGGGAAACTGGGCAACATGATTAG | 735 | 0.4027 | MLCVSNSSSLLLFLYVQFDKKKGMVEQQECEGRKEMEEEIEMKESKFKRICVFCGSSPGNKSSYKDAAIELGNELVSRNIDLVYGGGSIGLMGLVSQAVYDGGGHVIGIIPRTLMPREITGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPAGLLNVDGYYNFLLSFIDKAVEEGFICPKARHIIVSAPSTKELVKKMEEYSPQHERIASKLSWETGQHD | 244 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car06g03462 | 244 | TIGRFAM | TIGR00730: TIGR00730 family protein | 48 | 225 | IPR005269 | GO:0009691|GO:0016787 | |
| Car06g03462 | 244 | PANTHER | LOG FAMILY PROTEIN YJL055W | 36 | 242 | - | - | |
| Car06g03462 | 244 | PANTHER | CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG1 | 36 | 242 | - | - | |
| Car06g03462 | 244 | SUPERFAMILY | MCP/YpsA-like | 47 | 225 | - | - | |
| Car06g03462 | 244 | Pfam | Possible lysine decarboxylase | 92 | 222 | IPR031100 | - | |
| Car06g03462 | 244 | Gene3D | - | 36 | 224 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Car06g03462 | Car-Chr6 | 65009215 | 65014148 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car06g03462 | K22522 | - | gmx:100815735 | 378.252 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Car06g03462 | 06 | 65009215 | 65014148 | Car06g03462 | 06 | 65009215 | 65014148 | ECH | |
| Car06g03462 | 06 | 65009215 | 65014148 | Car01g02510 | 01 | 50809482 | 50815047 | ECH | |
| Car01g02510 | 01 | 50809482 | 50815047 | Car06g03462 | 06 | 65009215 | 65014148 | PCT |