Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02510 ATGGAGAGAGAGACAGAGATGAAGTTATCAAAGTTTAAGAGAATTTGTGTGTTTTGTGGTAGTAGTCCTGGTAACAAAACTAGTTATAAGGATGCTGCTATTGAACTTGGAAGAGAATTGGTGTCAAGAAATATTGATCTAGTTTATGGAGGAGGCAGCATTGGTTTGATGGGGTTAATTTCTCAAGCTGTTCACAATGGTGGTAGACATGTAATTGGAGTGATTCCTAAAACACTTATGCCAAGAGAGCTGACTGGAGAAACAGTGGGGGAAGTGAAGGCAGTAGCAGACATGCATCAAAGGAAAGCTGAGATGGCTAGAAATTCTGATGCCTTTATTGCCTTACCCGGTGGCTATGGGACACTTGAGGAGCTCCTTGAGGTGATAACATGGGCTCAACTTGGCATCCATGATAAACCGGTGGGATTGTTGAATGTTGATGGATACTACAATTCCTTTTTGTCTTTCATTGACAAAGCTGTGGAGGAAGGATTCATTAGCCCCACAGCTCGCCATATAATCGTATCAGCCCCAACACCCAAAGACCTAGTCAAAAATATGGAGGAATATTTCCCACAACATGAAAGAGTTGCCTCCAAGCTAAGCTGGGAAAGTGAACAGCTAGATTAG 630 0.4238 MERETEMKLSKFKRICVFCGSSPGNKTSYKDAAIELGRELVSRNIDLVYGGGSIGLMGLISQAVHNGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMARNSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSFLSFIDKAVEEGFISPTARHIIVSAPTPKDLVKNMEEYFPQHERVASKLSWESEQLD 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02510 209 Gene3D - 2 189 - -
Car01g02510 209 PANTHER LOG FAMILY PROTEIN YJL055W 1 209 - -
Car01g02510 209 TIGRFAM TIGR00730: TIGR00730 family protein 13 190 IPR005269 GO:0009691|GO:0016787
Car01g02510 209 Pfam Possible lysine decarboxylase 57 187 IPR031100 -
Car01g02510 209 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 1 209 - -
Car01g02510 209 SUPERFAMILY MCP/YpsA-like 11 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02510 Car-Chr1 50809482 50815047 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02510 K22522 - gmx:100811156 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02510 01 50809482 50815047 Car01g02510 01 50809482 50815047 ECH
Car06g03462 06 65009215 65014148 Car01g02510 01 50809482 50815047 ECH
Car01g02510 01 50809482 50815047 Car06g03462 06 65009215 65014148 PCT