Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03443 ATGGCGaaaaagaagaagaataagggaaatgcagaaaacaacaatcacaatcacaaaaacaacaacaacaacaataacaattacaataacaataacaataacaatgacgacaacaacagcaatgacgacaataacaacaacaataacaatggaggaaagaaagaagagaacaacaacaacaacacaacGGTCTTGAAAGTTGCTATGCATTGCGACGGTTGCGCTTCCAAAATCATCAAACACCTTCATTCTATCAAAGGCGTGGAGACGGTGAAAGCAGAGAGCGAGACTGGAAAGGTAACCGTCACCGGAAATGTGGACCCCACAAAATTGAGGGACAACCTAGCGGAGAAGACAAAGAAAAATGTTGAACTTATTTCTCCACAACCCAAGAAGGGAAAGGAGAAGGAGAACAAGGAAAATGAATCAAACAAAATTTCTGATGACAAGAAAACCGACGACAAAAAAAACAAAGACAAAGAGACGGTTTCTACGGCTGTATTGAAGATGTCACTACACTGCCAAGGATGTTGTGACAAGATTGGCAAGATGGTGTCGAAAACCAAAGGGGTACTTGAAATAGCAATAGACAAAGAGAAGGAAACGGTGACTGTGAAGGGTACAATGGATGTGAAAGCATTGGTTGAGAATTTAACAGAGAAGTTTAAGAGAAAGGTTGAGATTGTCCCTTCAaagaaagacaaagaaggaggtgaaggaggtgaaggaggaggtgggaagaagaaaaacaagaacaagggtggtggtggtggtggtggtggtggAGAAGGGGGTGCTAATAACGATAACAATGAAGGAGGAGAAGTTAAAATAATAGAATATTCGGTTCAACCACCCTTTGGTCATGGTAATGAATATGTTCGTGTTGAAGGGTATAACTATCCACAAGTCTACGAAGAGCTGTTACATATGCATATGCATTCACAACCACCACAAATGTTTAGTGATGAGAATCCTAATGCTTGCTTGATCATGTGA 999 0.2983 MAKKKKNKGNAENNNHNHKNNNNNNNNYNNNNNNNDDNNSNDDNNNNNNNGGKKEENNNNNTTVLKVAMHCDGCASKIIKHLHSIKGVETVKAESETGKVTVTGNVDPTKLRDNLAEKTKKNVELISPQPKKGKEKENKENESNKISDDKKTDDKKNKDKETVSTAVLKMSLHCQGCCDKIGKMVSKTKGVLEIAIDKEKETVTVKGTMDVKALVENLTEKFKRKVEIVPSKKDKEGGEGGEGGGGKKKNKNKGGGGGGGGGEGGANNDNNEGGEVKIIEYSVQPPFGHGNEYVRVEGYNYPQVYEELLHMHMHSQPPQMFSDENPNACLIM 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03443 332 Gene3D - 161 236 - -
Car06g03443 332 Gene3D - 59 133 - -
Car06g03443 332 Coils Coil 1 21 - -
Car06g03443 332 MobiDBLite consensus disorder prediction 119 159 - -
Car06g03443 332 MobiDBLite consensus disorder prediction 14 59 - -
Car06g03443 332 CDD HMA 64 124 IPR006121 GO:0046872
Car06g03443 332 MobiDBLite consensus disorder prediction 229 249 - -
Car06g03443 332 ProSiteProfiles Heavy-metal-associated domain profile. 61 117 IPR006121 GO:0046872
Car06g03443 332 SUPERFAMILY HMA, heavy metal-associated domain 165 220 IPR036163 GO:0046872
Car06g03443 332 Pfam Heavy-metal-associated domain 65 120 IPR006121 GO:0046872
Car06g03443 332 Pfam Heavy-metal-associated domain 172 226 IPR006121 GO:0046872
Car06g03443 332 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 32 332 IPR044594 GO:0046872
Car06g03443 332 MobiDBLite consensus disorder prediction 229 273 - -
Car06g03443 332 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3 32 332 - -
Car06g03443 332 SUPERFAMILY HMA, heavy metal-associated domain 62 124 IPR036163 GO:0046872
Car06g03443 332 MobiDBLite consensus disorder prediction 1 59 - -
Car06g03443 332 CDD HMA 172 216 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03443 Car-Chr6 64627993 64630001 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03443 - - mtr:MTR_4g057765 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02528 01 51023469 51025010 Car06g03443 06 64627993 64630001 PCT