Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03434 ATGCCTTTCTTCTATCTTCTTGTACTATCACTACTCACAATTTGTTCTAATGCTCAGGGTCCACCTTCACCTGGCTACTACCCTAGTTCCAAAACTAGTCCTATTAGCTTTGGTCAAGGATTTAGAAACCTTTGGGGACCTCAGCATCAGAGAGTGGACCAAACTTCACTAACAATATGGCTTGACTCTAACTCAGGGAGTGGATTCAAGTCACTTCACTCATATAAATCTGGATACTTTGGTGCTGCAATTAAGCTTCAACCTGGCTATACTGCAGGAGTTATTACTTCTCTCTATCTTTCAAATAATCAAGACCATCCAGGAAACCATGATGAAATTGACATTGAATTTCTTGGAACTACACCAGGTAAACCATATGTGTTGCAGACAAATGTATATATAAGAGGAAGTGGAGATGGGAACATTATAGGAAGAGAGATACAGTTTCATCTTTGGTTTGATCCAACTCAAGATTTTCACAACTATGCTATTCTATGGAAACCCAGTGAGCTAATATTTTTAGTGGATGATGTTCCCATAAGGAGGTATCCTAGAAAAAGTGATGCCACATACCCTTCAAGACCAATGTATGTGTATGGATCAATATGGGATGCATCCTCTTGGGCAACAGAAGATGGAAAGTACAAAGCAAATTATCAGTACCAACCCTTCATTGGAAGGTACAAAAACTTCAAATTACAAGGTTGTACTATTCAATCCTCTGCCTCATGCAAACCACCCTCTACCTCTTCTTTTGGGTATGGTAGCCTTAGTCCTCAACAATATGTGGCCATGCAATGGGTCCAAAATAATTACATGGTGTATAATTATTGTCATGACCCCAGAAGAGACCACAATCTTATCCCTGAGTGCTAA 876 0.395 MPFFYLLVLSLLTICSNAQGPPSPGYYPSSKTSPISFGQGFRNLWGPQHQRVDQTSLTIWLDSNSGSGFKSLHSYKSGYFGAAIKLQPGYTAGVITSLYLSNNQDHPGNHDEIDIEFLGTTPGKPYVLQTNVYIRGSGDGNIIGREIQFHLWFDPTQDFHNYAILWKPSELIFLVDDVPIRRYPRKSDATYPSRPMYVYGSIWDASSWATEDGKYKANYQYQPFIGRYKNFKLQGCTIQSSASCKPPSTSSFGYGSLSPQQYVAMQWVQNNYMVYNYCHDPRRDHNLIPEC 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03434 291 Pfam Glycosyl hydrolases family 16 39 220 IPR000757 GO:0004553|GO:0005975
Car06g03434 291 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 31 5 291 - -
Car06g03434 291 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 291 IPR013320 -
Car06g03434 291 Gene3D - 17 291 - -
Car06g03434 291 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 28 228 IPR000757 GO:0004553|GO:0005975
Car06g03434 291 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 5 291 IPR044791 GO:0004553
Car06g03434 291 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 254 291 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Car06g03434 291 PIRSF EndGlu_transf 3 291 IPR016455 GO:0010411|GO:0016762|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03434 Car-Chr6 64447969 64450794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03434 6 291 Glycoside Hydrolase AT3G44990 65.398 1.13e-142 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03434 K08235 - gmx:100781528 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02535 01 51086321 51088270 Car06g03434 06 64447969 64450794 PCT