Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03406 ATGGGGTATTCAAGTGCTTTAGCAACTTTTTTTGTTTCCCTTGTTATTGTGGTCTTCATTAATGAAATAGATGGAAAACCTTTAGTCCCTGCATTTTTCATATTTGGAGATTCTAGTTTTGATGTTGGCAATAACAACAACCTACCAACTACGATTAAAGCAAATTTTCCACCTTATGGAAGAGACTTTATGAATCACATTCCAACCGGAAGGTTTTGCAATGGAAAACTTACTATCGACTTCGCATCTGAATTTCTTGGATTTATCTCTTACCAACCAGCTTACCTCAATTTATATATCAAGGGAAAAAACCTGTTGAATGGTGCCAATTTTGCCTCATCTGGTTCTGGTTACCATGAGTCTACAGCCAAACTATATAAATCAATTTCATTGAATCAGCAGTTGGAATTCTATAAGGATAGCCAAAACGAATTAATGAAAATAGCAGGACGATCAGATGCATTATCAATTATATTTGGTGCTGTATATCTTGTTGGTGCTGGGACTGGTGATTTTTTGTTGAATTATTACATGAATCCTTTGCTTTACAATGTTTATACGCCTGATCAATTCTCAGACATTGTTGTGGGATGCTATGCCAATTTCATTCAGAATTTATATGCACTAGGAGCAAGGAAGATTGTTGTGACAACGTTAACTGCAATAGGTTGCTTGCCTGCAACCATCACTCTGTTTGGTCCTGCTCATAGCAACAAATGTGTAGTCAAAATAAACAATGTTGCTATTAACTTTAATCGAAAGCTCAACTCAACATCTGTGAACTTGAGAAAAGTGCTTCCTCGCCTCAATTTGGTCCTCCTTGATATCTACCAACCTCTCTATAATTTAGTCACTGAACCCTCTAAATATGGATTTTCTGAAGCAAGGAATAGTTGTTTTGGGACAAACTTGCTAGAGAGAACTTCTATATTTCGTGATAAAAATGTGATTGTAAGATTATGTGCTAATGCATCTAACTATGTATTTTGGGACGACCTTCATCCCACGGAGGCTGCAAACAAGTATTTTGCTGATAAATTGATTTTAGAAGGCATTTCCGTTATACACTAA 1071 0.3604 MGYSSALATFFVSLVIVVFINEIDGKPLVPAFFIFGDSSFDVGNNNNLPTTIKANFPPYGRDFMNHIPTGRFCNGKLTIDFASEFLGFISYQPAYLNLYIKGKNLLNGANFASSGSGYHESTAKLYKSISLNQQLEFYKDSQNELMKIAGRSDALSIIFGAVYLVGAGTGDFLLNYYMNPLLYNVYTPDQFSDIVVGCYANFIQNLYALGARKIVVTTLTAIGCLPATITLFGPAHSNKCVVKINNVAINFNRKLNSTSVNLRKVLPRLNLVLLDIYQPLYNLVTEPSKYGFSEARNSCFGTNLLERTSIFRDKNVIVRLCANASNYVFWDDLHPTEAANKYFADKLILEGISVIH 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03406 356 PANTHER GDSL ESTERASE/LIPASE EXL3 26 353 - -
Car06g03406 356 SUPERFAMILY SGNH hydrolase 161 347 - -
Car06g03406 356 Gene3D SGNH hydrolase 21 350 IPR036514 -
Car06g03406 356 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE FAMILY PROTEIN, EXPRESSED 26 353 - -
Car06g03406 356 Pfam GDSL-like Lipase/Acylhydrolase 33 346 IPR001087 GO:0016788
Car06g03406 356 CDD SGNH_plant_lipase_like 30 348 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03406 Car-Chr6 63929403 63933016 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03406 27 347 Acyl Lipid Metabolism Gene Families AT4G10950 30.960 5.09e-53 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03406 - - gmx:100775618 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02192 01 47672774 47675577 Car06g03406 06 63929403 63933016 PCT