Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02192 ATGCAGCATTCAACTTATTTCTTAACTTTCTTGCTTCTTGTTGCAGTGTTCAACAATGAGGTTAAAGGACAGCCTCTTGTCCCTGCATTGTTCATATTTGGTGACTCTGTTGTTGATGCAGGAAATAACAACAACTTATACACAGTTGTTAAATCAAACTTCCCTCCTTATGGAAGAGACTTCAAGGATCACATGCCAACTGGGAGGTTTTGCAATGGAAAACTTGCATCAGATTTTACAGCGGAAAACCTTGGATTTACTACTTACCCACCAGCTTATCTCAACTTAGAGGTCAAAGGAAAAAACCTCTTGAATGGTGCCAACTTTGCCTCTGCTGCTTCTGGCTACTATGATTCTACGGCCAAACTATATCATGCAATTTCAATGACCGAGCAGCTGGAACACTATAAAGATTGCCAGAATATATTGGTTGGAGTAGCAGGGAAATCAAATGCTTCATCAATTATATCTGGTGCTGTATATCTTATTAGTGCTGGAAGCAGTGACTTTATTCAGAATTATTACATAAATCCTCTGCTTTACAAGGTTTACACTGCTGATCAATTCTCAGACATTCTCATGCAAAACTATGCTATTTTCATTCAGAATTTATATGCACTTGGGGCAAGGAGAATTGGTGTGACAACATTACCTCCAATGGGTTGCTTGCCAGCAGCCATCACTCTTTTTGGTTCTCATAGCAATGAATGTGTGGCCAGGTTAAACACTGATGCTATGAACTTCAACAATAAGCTAAACACCACAACTCAAAGCTTGCAAAAATTGCTTAGTAACCTAACATTGGTTGTCCTTGATATCTACCAACCTCTCCATGACCTTGTCACTAAGCCTTCAGAAAATGGATTTTTTGAAGCAAGGAAGGCTTGTTGTGGAACTGGCTTGGTAGAGATATCTATATTGTGCAATAAGGACTCCATAGGAACATGTGCCAATGCTACTGAGTATGTATTTTGGGATGGTTTTCATCCCTCTGAGGCTGCAAACAAGGTTTTGGCTGATGATTTGCTCATTTCTGGCATCTCTCTCATATCCTAA 1056 0.3958 MQHSTYFLTFLLLVAVFNNEVKGQPLVPALFIFGDSVVDAGNNNNLYTVVKSNFPPYGRDFKDHMPTGRFCNGKLASDFTAENLGFTTYPPAYLNLEVKGKNLLNGANFASAASGYYDSTAKLYHAISMTEQLEHYKDCQNILVGVAGKSNASSIISGAVYLISAGSSDFIQNYYINPLLYKVYTADQFSDILMQNYAIFIQNLYALGARRIGVTTLPPMGCLPAAITLFGSHSNECVARLNTDAMNFNNKLNTTTQSLQKLLSNLTLVVLDIYQPLHDLVTKPSENGFFEARKACCGTGLVEISILCNKDSIGTCANATEYVFWDGFHPSEAANKVLADDLLISGISLIS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02192 351 PANTHER GDSL ESTERASE/LIPASE EXL3 8 350 - -
Car01g02192 351 PANTHER GDSL-MOTIF LIPASE 8 350 - -
Car01g02192 351 CDD SGNH_plant_lipase_like 28 343 IPR035669 -
Car01g02192 351 SUPERFAMILY SGNH hydrolase 30 341 - -
Car01g02192 351 Coils Coil 351 351 - -
Car01g02192 351 Pfam GDSL-like Lipase/Acylhydrolase 30 341 IPR001087 GO:0016788
Car01g02192 351 Gene3D SGNH hydrolase 16 345 IPR036514 -
Car01g02192 351 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 30 41 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02192 Car-Chr1 47672774 47675577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02192 25 342 Acyl Lipid Metabolism Gene Families AT4G10950 34.268 9.49e-65 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02192 - - gmx:100804640 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02192 01 47672774 47675577 Car06g03406 06 63929403 63933016 PCT