Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03381 ATGGAAACTGGAAGCATTACTGACTTCCTTCGGGATAAGAATATTTTGGTCCTCGGCGCCACTGGCTTCCTTGCAAAAATTTTTATTGAGAAGATACTAAGAGTTCAACCAAATGTGAAGAAACTTTATCTTCTTATGAGAGCTACGGATACTGAATCTGCAACTAAACGGTTGAACAATGAGATTTTGCGGAAGGACTTGTTCAAATTGCTAAAGGAAAATCTTGGTGCAAAGTTCAATAGCTTTGTCTTAGAAAAATTGAGTGTAGTGCCAGGGGACATTTCCCAAGAGGATTTCAACTTGAAAGACTCAAATCTACTTAAAGAGATTTGTGATCAAACTGATGTCATAGTGAATTTAGCTGCAACAACTAACTTTGATGAAAGATATGATGTTGCATTGGGTTTAAATACATTTGGAGTTAAGCATGTCATAAACTTCGCCAAAAAATGTATTAACCTAAGGGTGCTTGTCCACGTATCAACAGCATATGTGTGTGGCGAGAGAGGAGGATTGATAATAGAGGATCCAATCCAATTGGGTGCATCATTAAATGGTGTGAAAGGACTAGACATTGATGAGGAAAAGAAAGTAGTTGAGGAAAAGATGAACAAGCTTCGACAAGAGGGAGCCACTGAAGAAGATATTAAAATTGCTATGAAGGACCTGGGTATTGAAAGAGCAAATTTATATGGATGGCCAAACACGTATGTTTTTACCAAAGCAATGGGAGAAATGCTTATAGAAACTATGAAGGAAACATTGTCCATTTTTATTGTGCGTCCTACAATGATTACTAGCACTTACAAAGAACCTTTCCCTGGTTGGGTGGAAGGAATAAGAACCATAGACAGTATAATTGTTGCTTATGGAAAAGGAAAATTGACATGCTTCCTTGCAAATGTTAAGGCAGTTTTTGATGTGATACCAGCTGATTTTGTGGTGAATGCAATGGTAGTTGGGATGGTGAGTCATGCAAATCAACCACGTGATAGCATTTATCAATTAGGTTCATCAATTGCGAATCCAATCACATATCAAAATCTCCATGAGTATGGTTTTAGATATTTTACTGCAAAACCATGTATTGATAAGGAAGGAAATCCCATCAAAGTTGGCAATGTTACAGTTTTGGACAACATGGCTGCTTTCCAAAGATATATGTTCATTCGCTACATACTTCCTCTAAAGGGGCTAAAGCTAGTGAATGCAGCATTTTGCCAGTATTTTCATGGTATATATTTTGATATCAACAGGAAGATCAACATTATCTTGCGATTGGTTGAACTTTATAGACCCTACTTGTTCTTTGATGGCATATTTGATAACATGAATGCAGAGAAGTTGCAAATAGAAGCAATAAAAAGTGGAGTGGAGATGAATTTGTTTTACTTTGATCCAAAAATGATTAACTGGGAAGACTACTTCATGAATGTCCATTTTCCTGGCATCGTCAAATATTGCTTCAAGTGA 1473 0.3673 METGSITDFLRDKNILVLGATGFLAKIFIEKILRVQPNVKKLYLLMRATDTESATKRLNNEILRKDLFKLLKENLGAKFNSFVLEKLSVVPGDISQEDFNLKDSNLLKEICDQTDVIVNLAATTNFDERYDVALGLNTFGVKHVINFAKKCINLRVLVHVSTAYVCGERGGLIIEDPIQLGASLNGVKGLDIDEEKKVVEEKMNKLRQEGATEEDIKIAMKDLGIERANLYGWPNTYVFTKAMGEMLIETMKETLSIFIVRPTMITSTYKEPFPGWVEGIRTIDSIIVAYGKGKLTCFLANVKAVFDVIPADFVVNAMVVGMVSHANQPRDSIYQLGSSIANPITYQNLHEYGFRYFTAKPCIDKEGNPIKVGNVTVLDNMAAFQRYMFIRYILPLKGLKLVNAAFCQYFHGIYFDINRKINIILRLVELYRPYLFFDGIFDNMNAEKLQIEAIKSGVEMNLFYFDPKMINWEDYFMNVHFPGIVKYCFK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03381 490 Pfam Male sterility protein 19 318 IPR013120 -
Car06g03381 490 CDD FAR-N_SDR_e 13 361 - -
Car06g03381 490 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 334 IPR036291 -
Car06g03381 490 CDD FAR_C 390 489 IPR033640 -
Car06g03381 490 Pfam Male sterility protein 391 490 IPR033640 -
Car06g03381 490 PANTHER FATTY ACYL-COA REDUCTASE 2 488 - -
Car06g03381 490 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 488 IPR026055 GO:0080019
Car06g03381 490 Gene3D - 7 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03381 Car-Chr6 63274141 63280361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03381 113 489 Acyl Lipid Metabolism Gene Families AT4G33790 57.825 9.03e-168 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03381 K13356 - gmx:100793197 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02219 01 47992373 47998102 Car06g03381 06 63274141 63280361 PCT