Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02219 ATGGAATTGGGAAGCATAATGCAGTTTCTTGAGGGCAGGACCATTTTAGTCACCGGTGCCACTGGCTTCCTCGCAAAAATATTTGTAGAAAAGATATTGAGGGTTCAACCAAAGGTGAAGAAACTTTACCTTCTCCTAAGAGCTAAGGATTCTGAATCTGCTACTCAACGCTTACGCACTGAGATCATAGGGAAGGACTTGTTCAAATTATTGAAAGAAAATTTGGGTACAAAATTCGACTCTTTTGTCTCTGAAAAGTTGACTGTGGTTCCCGGAGACATTTCTCAAGAGGGTTTGAATTTGAAGGAATCAATTCTAGAAGAGAATATTTGCAATCAAACAGATGTTATAATTAATTTAGCTGCAACAACTAAATTTGATGAAAGATATGATGTTGCATTGGGTATAAATACATTAGGAGCTAAACATGTTTTGAGCTTTGCCAAAAAATGTGTTAAACTAAAGGTGCTTGTCCATGTTTCGACAGCCTATGTGTGTGGTGAGAGAGGAGGACTCATACTTGAGGATCCTCATCCCTTTGGTGTGTCACTAAATGGAGTGCATGGACTAGACATTTGTATGGAAAAGAAATTGGTGGAGAGGAAATTGAAACAGCTTCAAGCAGAGGGAGCAACAGAACATGATATTGAAGTGGCCATGAAGGACTTGGGTATGGAAAGAGCTAATGAATATGGATGGCCAAACACTTACGTGTTTACAAAAGCAATGGGAGAAATGCTTGTAGAAGCTTCCAAAGAAAATATGTCAGTTGTTATTCTACGCCCTACCATCGTTACTAGCACTTATAGAGAACCTTTTCCTGGATGGGTTGAAGGCTTAAGAACCATAGACAGTATAATTGTTGCTTATGGTAAAGGAAAATTAACAAGCTTCATGGCGGATCTTGACGCAGTTTTTGACGTGATACCCGCAGACATGGTGGTGAATGCAATTATAGTGGCCATGATGGCTCATGCAAATCAAGCTAGTGATAATCATATAATATATCATGTGGGTTCCTCCGTTAGAAATCCAATTAAATATCGTAGTTTGAAAGACTATAATTTTAGATATTTCACGGAAAAACCTTGGATAAACAAGGATGGAAAACCGGTTAAGGTTGGTAAAGTTACCGTGTTTAATAACATGGCTAACTTCCGAAGATACATGTTCATACGTTACGTGCTTCCTTTAAAGGGACTAGAGATGGCGAATTCAATTTTATGTCAATATTTTAAAGGCATATCTCTTGACCTTAACAGAAAAATCAATACGGTTATGCGATTAACTGATCTATACCTCCCATATTTGTTCTTCAATGGCGTATTTGATGATATGAATACACAAAAATTGCTATTAGCTGCAAAACAAGGAGGGGTAGAAATGAATTTGTTTTACTTTGATCCTAAGATTATTGATTGGGATAATTACTTCATGAATATCCACATTCCTGGTATCTTCACTTATGCCTTCAAGTGA 1479 0.3739 MELGSIMQFLEGRTILVTGATGFLAKIFVEKILRVQPKVKKLYLLLRAKDSESATQRLRTEIIGKDLFKLLKENLGTKFDSFVSEKLTVVPGDISQEGLNLKESILEENICNQTDVIINLAATTKFDERYDVALGINTLGAKHVLSFAKKCVKLKVLVHVSTAYVCGERGGLILEDPHPFGVSLNGVHGLDICMEKKLVERKLKQLQAEGATEHDIEVAMKDLGMERANEYGWPNTYVFTKAMGEMLVEASKENMSVVILRPTIVTSTYREPFPGWVEGLRTIDSIIVAYGKGKLTSFMADLDAVFDVIPADMVVNAIIVAMMAHANQASDNHIIYHVGSSVRNPIKYRSLKDYNFRYFTEKPWINKDGKPVKVGKVTVFNNMANFRRYMFIRYVLPLKGLEMANSILCQYFKGISLDLNRKINTVMRLTDLYLPYLFFNGVFDDMNTQKLLLAAKQGGVEMNLFYFDPKIIDWDNYFMNIHIPGIFTYAFK 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02219 492 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 358 IPR036291 -
Car01g02219 492 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 490 IPR026055 GO:0080019
Car01g02219 492 Pfam Male sterility protein 17 318 IPR013120 -
Car01g02219 492 CDD FAR_C 392 491 IPR033640 -
Car01g02219 492 Gene3D - 7 380 - -
Car01g02219 492 Pfam Male sterility protein 394 492 IPR033640 -
Car01g02219 492 PANTHER FATTY ACYL-COA REDUCTASE 2 490 - -
Car01g02219 492 CDD FAR-N_SDR_e 13 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02219 Car-Chr1 47992373 47998102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02219 112 491 Acyl Lipid Metabolism Gene Families AT4G33790 61.053 3.35e-176 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02219 K13356 - gmx:100789566 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02219 01 47992373 47998102 Car06g03381 06 63274141 63280361 PCT