Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03354 ATGAATGAAGTGTTACATTCTCCAACATCAACACCCCATTTTTCTccaccaaccaccacctaccaagaacaacaacaaccaccaTCACACtcttcttcttcgtcatcatctttttcttcttTAGCCGTTGCAATAAACGATAGTTTTTCTAACGTAACCGACTGTGACGCAGAGGAGATCACTGTCACAGAGAGGAAAAGAACAGAACAAGAGTTATCCCTTTTGGCCATTCTTGTGACCCTTTTAAGGAAATCCTTAGTTGCTTGTTCAAGTGATGGAAGAGAGTTTTGTGCCATGGAAATTGGTTGCCCCACTAACGTGCGCCATGTTGCGCATGTTACTTTTGATAGGTTTAATGGTTTTTTGGGTTTGCCTCTTGAGTTTCAACATTATGTTTCCACTACACCTCCTAGTGCTAGTGCAACTGTTTTTGGAGTTTCAACAGAATCCATGCAATTATCATATGACAAAAGAGGGAACGTTGTGCCAACAATTCTACTACTAATGCAAAGCCACTTGTATGCTCAAGGAGGGTTGCAGGCAGAGGGAATTTTCAGAATTAATGCAGACAATAGTCAAGAGGAATATGTTAGGGATCAATTAAATAAAGGAGTGGTTCCAGAAGATATTGATGTACATTGTTTGGCAGGATTGATTAAGGCTTGGTTTAGGGAGCTGCCAAGAGGTGTTATGGATTCGTTATCTCCAGAGCAGGTAATGCAATGTCAAACAGAAGAGGATTGTGCTGAATTGACAAGTCAGCTACCTCAAACTGAAGCTTCTCTTTTGGATTGGACTATCAATCTGATGGCTGATGTTGTACAAGAGGAACAACTGAATAAGATGAATGCACGCAACATTGCCATGGTTTTTGCACCAAACATGACTCAGATAGTAGACCCTTTGACTGCAATGATGTATGCAGTTCAAGTGATGAACTTCTTGGCGACACTTGTATCAAGGACACTGAAGGCAAGGAAGGGTTCTTCTGATGTAGAATCATCATCATCTGGAATATTTTATATGCAGCCTTTTGACAAGAATGTGGAACGTAGTCTTTTGAAGTCCTTTCAACAACAAGATGTTTCAACAAAAAATGAAGTTCTGATCAATCAATGA 1119 0.3753 MNEVLHSPTSTPHFSPPTTTYQEQQQPPSHSSSSSSSFSSLAVAINDSFSNVTDCDAEEITVTERKRTEQELSLLAILVTLLRKSLVACSSDGREFCAMEIGCPTNVRHVAHVTFDRFNGFLGLPLEFQHYVSTTPPSASATVFGVSTESMQLSYDKRGNVVPTILLLMQSHLYAQGGLQAEGIFRINADNSQEEYVRDQLNKGVVPEDIDVHCLAGLIKAWFRELPRGVMDSLSPEQVMQCQTEEDCAELTSQLPQTEASLLDWTINLMADVVQEEQLNKMNARNIAMVFAPNMTQIVDPLTAMMYAVQVMNFLATLVSRTLKARKGSSDVESSSSGIFYMQPFDKNVERSLLKSFQQQDVSTKNEVLINQ 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03354 372 PANTHER MKIAA1688 PROTEIN 1 359 IPR044785 GO:0005096
Car06g03354 372 CDD RhoGAP 163 320 - -
Car06g03354 372 PANTHER PAK-BOX/P21-RHO-BINDING DOMAIN RHO GTPASE ACTIVATING PROTEIN 1 359 - -
Car06g03354 372 SUPERFAMILY GTPase activation domain, GAP 141 319 IPR008936 GO:0007165
Car06g03354 372 SMART RhoGAP_3 160 323 IPR000198 GO:0007165
Car06g03354 372 Pfam P21-Rho-binding domain 100 130 IPR000095 -
Car06g03354 372 ProSiteProfiles Rho GTPase-activating proteins domain profile. 146 323 IPR000198 GO:0007165
Car06g03354 372 Pfam RhoGAP domain 163 297 IPR000198 GO:0007165
Car06g03354 372 Gene3D Rho GTPase activation protein 135 330 IPR008936 GO:0007165
Car06g03354 372 MobiDBLite consensus disorder prediction 1 36 - -
Car06g03354 372 Gene3D CRIB domain 97 134 IPR036936 -
Car06g03354 372 SMART PBD_5 101 135 IPR000095 -
Car06g03354 372 ProSiteProfiles CRIB domain profile. 101 114 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03354 Car-Chr6 62880824 62885149 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03354 - K20642 mtr:MTR_4g052850 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02236 01 48194749 48198766 Car06g03354 06 62880824 62885149 PCT