Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02236 ATGACACAAATTCTCCACTCTCCACCCCATTTTGCTCCATCAACAACAACCtcttctccttctccttcttcttcctctcctctctcttcattctcttGCCATGCCATTTTTCAACCTCCCTCACACCCACATTTTCCACTTTTTGAACTTCTATTGACCCTTTTCAGAAAATCTTTGTTTCCTTTCAAGAATAGTGCCACCAAGACCCTCTGCAATATGGACATTAGTCCTCCTACTAACGTGCGCCATGTTGCGCATGTTACCTTTGATAGGTTCAATGGTTTCTTGGGTTTGCCTGATGAGTTTGAACCTGATGTGCCCAGAAGACCTCCTAGTGCTAGTGCAACTGTTTTTGGAGTTTCAACAGAATCCATGCAATTATCTTATGACTCAAGAGGGAACAGTGTGCCAACAATTCTTCTGTTAATGCAAAGGCATCTCTATGTTCAAGGAGGGTTGCAGGTGGAGGGGATTTTCAGAATTAATCCAGATAATACTCAAGAGGAACATGTTAGGGATCAATTGAACTTAGGAAATGTCCCTGATGGGATTGATGTACATTGTTTGGCAGGACTAATTAAGGCATGGTTTAGGGAGCTTCCTACCGCCATTCTCGACTCATTATCACAAGAGCAGGTGATGCAATGCCAGACTGAGGAAGAGTGTATTGAACTAGTGAAGCATTTACCTCATACAGAAGCTACACTCTTGGATTGGGCCGTCAATCTGATGGCTGACGTTGTCCAACATGAACATCTTAATAAGATGAATGCACGCAACATTGCCATGGTTTTCGCACCAAACATGACTAAGATGGCAGATCCATTCACTGCATTAATGTATGCAGTTCAAGTGATGAATTTCTTGAAGACACTTATAATAAGGACGCTACGAGAAAGAATGGATTCTGTGGTGGAATCTAATCCTAAATTGAATTTAGAACCTTCTGATGAGAATGGACACCATAGACTTTTGAAATCATGCCAGCAAGAAGATACTGCAGTAGACAATGAAGAGGCTCAAGAGGAAAACTTTGTTTCAGAGAAACCTGTCTTAGAATGTTCAACTGAATCCCTCCAAAATAACTCCTCAACTGGAGGAGAATCTGGTAGTTTGATAAGCACTTCTGAGAATCCAGTTTGCAATGAGGACTTGTATTGTGAGTTTCCGCCCAAAAGAAACATGGGGAAGAATAAGTCTGGTCAATCAAGTAGTTCAAATGCTAGAAAAGGGTCTAAAAAGACAAGAGGCCAGCAACATGTGATCAATGAAAAAGTGTTGGTTGAGAAAAAGGGAATGAGGACTTTGAGCAACACTGATACAAGATCCGACAGAGTAGAAGCGTGGCGGTAA 1353 0.4021 MTQILHSPPHFAPSTTTSSPSPSSSSPLSSFSCHAIFQPPSHPHFPLFELLLTLFRKSLFPFKNSATKTLCNMDISPPTNVRHVAHVTFDRFNGFLGLPDEFEPDVPRRPPSASATVFGVSTESMQLSYDSRGNSVPTILLLMQRHLYVQGGLQVEGIFRINPDNTQEEHVRDQLNLGNVPDGIDVHCLAGLIKAWFRELPTAILDSLSQEQVMQCQTEEECIELVKHLPHTEATLLDWAVNLMADVVQHEHLNKMNARNIAMVFAPNMTKMADPFTALMYAVQVMNFLKTLIIRTLRERMDSVVESNPKLNLEPSDENGHHRLLKSCQQEDTAVDNEEAQEENFVSEKPVLECSTESLQNNSSTGGESGSLISTSENPVCNEDLYCEFPPKRNMGKNKSGQSSSSNARKGSKKTRGQQHVINEKVLVEKKGMRTLSNTDTRSDRVEAWR 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02236 450 CDD CRIB 73 116 - -
Car01g02236 450 CDD RhoGAP 137 293 - -
Car01g02236 450 Pfam RhoGAP domain 137 271 IPR000198 GO:0007165
Car01g02236 450 SMART RhoGAP_3 134 297 IPR000198 GO:0007165
Car01g02236 450 Gene3D Rho GTPase activation protein 105 312 IPR008936 GO:0007165
Car01g02236 450 MobiDBLite consensus disorder prediction 417 450 - -
Car01g02236 450 ProSiteProfiles Rho GTPase-activating proteins domain profile. 120 301 IPR000198 GO:0007165
Car01g02236 450 MobiDBLite consensus disorder prediction 1 24 - -
Car01g02236 450 Gene3D CRIB domain 71 104 IPR036936 -
Car01g02236 450 MobiDBLite consensus disorder prediction 396 412 - -
Car01g02236 450 PANTHER MKIAA1688 PROTEIN 1 450 IPR044785 GO:0005096
Car01g02236 450 SUPERFAMILY GTPase activation domain, GAP 115 294 IPR008936 GO:0007165
Car01g02236 450 ProSiteProfiles CRIB domain profile. 75 88 IPR000095 -
Car01g02236 450 PANTHER PAK-BOX/P21-RHO-BINDING DOMAIN RHO GTPASE ACTIVATING PROTEIN 1 450 - -
Car01g02236 450 Pfam P21-Rho-binding domain 74 102 IPR000095 -
Car01g02236 450 MobiDBLite consensus disorder prediction 351 381 - -
Car01g02236 450 SMART PBD_5 75 109 IPR000095 -
Car01g02236 450 MobiDBLite consensus disorder prediction 331 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02236 Car-Chr1 48194749 48198766 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02236 - K20642 ccaj:109798318 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02236 01 48194749 48198766 Car06g03354 06 62880824 62885149 PCT