Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03316 ATGTCCATAAAAGAATGCAGCCACCACGACGACGAAGACCGCCGCCAACTCCTCCACCGCATACTGGCGGCGATAGCATCACTCATAATTCTAATACTCGTAACGATCTTCTTAATATGGATAATTCTCAAACCTACAAAACCACGTTTCACAATCCAAGACGCCACAATTTACACGTTCAACATCTCATCTCCAATTTCTTCACCTTTTCCAACACCAAACACACTTACTCTCACAATGCAAGTCACACTCTCAATTCATAACCCAAACAACAGAATCGGAATTTACTATCAAAAACTCCACGTGTACGGCTCTTATAAAAACCAGCAGATCTCACTCCCCACGGTAATTCCTGACACTTACCAAGGTCATAAGGATTTTACCGTTTGGTCGCCGTTTATTTACGGCGTTGGTGTTCCCGTTTCGCCGTCTAGACTTAGCGCTTTAGTACAAGATGAGAATAACGGAATGGTTTTGGTCAACGTTAAAGTTAACGGAAGGGTTAAGTGGAAAGTAGGGAGTTGGATCTCTGGAAGGTACCATATTTTTGTTAACTGTCCGGCTTATGTTAGGTTCGCCGGTGATCGGAATAATGGGATCGGAGTTGTTGCTCCGGCGGTTAAGTTTCAGCTTTTGCAAAGTTGTAGTGTTGACGTTTAG 660 0.4348 MSIKECSHHDDEDRRQLLHRILAAIASLIILILVTIFLIWIILKPTKPRFTIQDATIYTFNISSPISSPFPTPNTLTLTMQVTLSIHNPNNRIGIYYQKLHVYGSYKNQQISLPTVIPDTYQGHKDFTVWSPFIYGVGVPVSPSRLSALVQDENNGMVLVNVKVNGRVKWKVGSWISGRYHIFVNCPAYVRFAGDRNNGIGVVAPAVKFQLLQSCSVDV 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03316 219 PANTHER OS05G0367900 PROTEIN 9 219 IPR044839 GO:0098542
Car06g03316 219 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 9 219 - -
Car06g03316 219 Pfam Late embryogenesis abundant protein 83 186 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03316 Car-Chr6 62222850 62223706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03316 15 186 EF-hand Containing Proteins AT5G21130 23.256 8.60e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03316 - - gmx:100819285 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02257 01 48340267 48341321 Car06g03316 06 62222850 62223706 PCT