Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02257 ATGACCAAAGAATGTGACTACCATGATGACGAATACCGCCAACTCGTCCGCCGCATATTCGCGGGCATTTTAACTTTTATAAtcttcatcctcttcgtcgtcttcttaatctggatcattcttcgtcCCACCAAACCTCGTTTTGTCCTCCAAGACGCAACCGTTTTCGCCTTCAACCTCTCTTCCACCGATGAACCACCGTCCCCAACCACCCCAATTACACCAAACACACTCACACTAACAATCCAAGCCACTCTCTCATCCATCAATCCAAACTCCAAGATCGGCATTTACTATCACAAACTTGACGCATACGTTTCTTACAGAGGACAACAAATCTCTCTCGCCACCCAACTTCCGCAAACTTATCAAGGTCACCGTGACATCACCGTTTGGTCGCCGTTACTTTACGGTGTCGGCGTTCCCGTTTCGCCTTACTTGTCGGAAATTCTTAGACAGGATCAACTTTCAGGTGGAGTGTTGGTCAACGTTAAAGTCAACGGGAGGGTTAAGTGGAAAGTGGGGACTTGGGTTTCTGGAAGGTATCATATTGATGTTAACTGTCCGGCGTTTATTCGTGTCGCCGGCGATAAGGGTGACGGTGGTTTTGGAGTTTCTGGTCCGGCGGTGAAGTTTCAGTTTTCGCAAAGTTGTGTTGTTGATGTTTAA 669 0.4425 MTKECDYHDDEYRQLVRRIFAGILTFIIFILFVVFLIWIILRPTKPRFVLQDATVFAFNLSSTDEPPSPTTPITPNTLTLTIQATLSSINPNSKIGIYYHKLDAYVSYRGQQISLATQLPQTYQGHRDITVWSPLLYGVGVPVSPYLSEILRQDQLSGGVLVNVKVNGRVKWKVGTWVSGRYHIDVNCPAFIRVAGDKGDGGFGVSGPAVKFQFSQSCVVDV 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02257 222 PANTHER OS05G0367900 PROTEIN 9 222 IPR044839 GO:0098542
Car01g02257 222 Pfam Late embryogenesis abundant protein 86 188 IPR004864 -
Car01g02257 222 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 9 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02257 Car-Chr1 48340267 48341321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02257 20 188 EF-hand Containing Proteins AT5G21130 24.706 3.80e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02257 - - pvu:PHAVU_005G120900g 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02257 01 48340267 48341321 Car06g03316 06 62222850 62223706 PCT