Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03309 ATGGTGTCTTCAAACATAGACCAAGAGAAATCATGTGTATTATTTAGAGTATGGAAAAAGATAAAGGAATCACCAAAGATTTTTATGAAGAAGGTTTTATGCATTTGTAGGATGTCAAAAGAGATAGCACAAGATGATCCAAGAAAAGTGATTCATTCACTAAAAGTTGGACTTGCAATCTCTTTGGTGTCTCTATTTTACTATTATCAACCACTTTATGAGAATTTTGGTCTTTCAGCAATGTGGGCTGTGATGACTGTTGTGGTAGTTTTTGAGTACACTGTGGGAGCCACTTTAGGAAAAGGTTTGAATAGAACAATGGCAACATTTTTAGCTGGTGCTCTAGGTGTTGGGGCTCATTACTTAGCTAGCCTATCTGGTGAAACAGGGGAACCAATTTTAATTGGTTTCTTTGTATTTGTGCAAGctgcaatagcatcatttataaggttcttcccaacagtgaaaacaagatatgattatgggatgcttatatttattttgacattctctttaatatctgtatctggatttcgtgatgatgaagtattaaaaatggctcataagagattatccaccatttttattggaggttctgcttgtgtgatgatttctatttttgtttgtcctgtttgggctggtgaagagttgcactattcaattgctCATAAGTTGGAAACACTTGGTGACTTCTTAGAAGCATTTGTAGGTGAGTATTTCAAAACATCAAAGGAAGAAGAATCTAAAGATAATAACAAGTCTTTTCTTGAAGGTTATAAAAGCATTCTCAATTCTAAAAGTAGTGAAGAGTCTCTGGCCAATTTTGCAAGATGGGAACCAGGTCATGGCAAGTTCAAATTTCGTCACCCATGGAACCAATATCTTAAAATTGGTACACTTTCTCGACAATGTGCATATCGAATGGAAGCTCTAAAGGAACAGCTCAATTCTGACACCAAAGTATCACCAGAAATTCGTTGTACAATCCAAGAACTGTGTTCTGAAATGAGTTTGGAATCAAGCATGGCTCTAAAAAAATTAGGTTCATCAATGAGAACAATGACAAGAACATCTTCAATAGAAACTCACATTGCAAATTCAAAAGCTGCAGTGAAAAGCCTTAACTCATTACTTCAATCAAGTTTATGGAAAGAAACAGATTTTTTATCAATAATACCAGCTGTGACAGTGGCTTCATTACTAATTGATATTGTTGATTGCACACAAGAAATAGCTGATTCTGTTCATGTTCTTGCCTCACTCATAAATTTTGATACTTTTAATGAAACAGAGAATAAATCACTCAAAGAAGAAGCATTACAATCTCCAACTTGTGAATGTCTTGAACCAACAAGTCCCAAAATTGAGAACAATCATATTGTTATTCAAGTTGAAGATTCGGATTTAGCTTTGTCGGATCGCGGAAATTTAATGTCTGATAAATGTAACAAAATTTGA 1458 0.2915 MVSSNIDQEKSCVLFRVWKKIKESPKIFMKKVLCICRMSKEIAQDDPRKVIHSLKVGLAISLVSLFYYYQPLYENFGLSAMWAVMTVVVVFEYTVGATLGKGLNRTMATFLAGALGVGAHYLASLSGETGEPILIGFFVFVQAAIASFIRFFPTVKTRYDYGMLIFILTFSLISVSGFRDDEVLKMAHKRLSTIFIGGSACVMISIFVCPVWAGEELHYSIAHKLETLGDFLEAFVGEYFKTSKEEESKDNNKSFLEGYKSILNSKSSEESLANFARWEPGHGKFKFRHPWNQYLKIGTLSRQCAYRMEALKEQLNSDTKVSPEIRCTIQELCSEMSLESSMALKKLGSSMRTMTRTSSIETHIANSKAAVKSLNSLLQSSLWKETDFLSIIPAVTVASLLIDIVDCTQEIADSVHVLASLINFDTFNETENKSLKEEALQSPTCECLEPTSPKIENNHIVIQVEDSDLALSDRGNLMSDKCNKI 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03309 485 Pfam Aluminium activated malate transporter 41 419 IPR020966 GO:0015743
Car06g03309 485 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 7 7 435 - -
Car06g03309 485 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 7 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03309 Car-Chr6 62113747 62116388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03309 29 476 Miscellaneous Gene Families AT2G27240 53.407 7.87e-174 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03309 - - aprc:113859727 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03309 06 62113747 62116388 Car06g03309 06 62113747 62116388 ECH
Car01g02266 01 48404702 48406977 Car06g03309 06 62113747 62116388 PCT