Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02266 ATGGTGTCTCAAACAAATCCAATAAGTATCAGAAAGGGTTGGCAATGTTTGATGAACTGGCATAGTGAGTTTATTGCTAATATTGTCAATGTGATGTTGCAACTGAAGAAACTTGGAAAAGAAGATCCTAGAAGGGCCATTCATTCTTTCAAAGTAGCATTTGCCATTACACTTGTTTCATCATTTTACTATTTTAATTCTCTCTATCATAGTTTTGGTTCTTCTGCAATGTGGGCTGTTATGACTGTCATTGTTGTCTCAGAATTTTCTGTAGGCAAGTTCTCAACACTTGGAAAAGGTTTAAATAGAGGTTTAGCAACATTTTTGGCTGGTGTTCTTGGGCTTGGATCTTATTACATGGTTCATTCAATTTCAAGAGGAGATCATATAATAGAACCTATACTTCTTGGAATCATAATATTTCTAGCAActgcaggggtaacatatattcgatttttacctcaaatgaaagcaagatatgattatgggttgctagtatttatcttgacattttgtttggtatctgtatcaagctttagagacaaagagatacttaaaactgcacaagatagggttaccacaattcttataggtggattaatttctgtgatggtttgcatctttgtgtgccctgtttgggctggtggtgatcttcacaatttagtatcaaaaaatattcaaaaactTGGTAACTTTTTAGAAGGTTTTGGAGATGAATATTTTGGAACATTAGAGGATGGAGAATCAAATAAATTATCAATGCAAGAATATAAAAGTGTACTTAATTCTAAACAAGTTGAAGATAACTTGATAAATTTTGCAAGGTGGGAACCCTGCCATGGTCGTTTCAGATTTCAATATCCTTGGCAACAATATCAAAAGATTGGAAACCTATCAAGGCAGTGTGCATATCGAATTGACACCCTAAATGGTTTCCTTAACAATTTTAGTAAGACACCAAAGGAAATGAGAAGCAAAATACAAGAACCATGCATGAAAATGAGCATAGAAACAGGAAAGGCATTAAAGCAATTATCAGTGTCACTCCATAAAATGATTCCACCATCTGCTGCAAACACTCACATTGCAGCATCTAAAATTGCTGCCACAAACCTCAGGTCCATGATCAAAACAAATTTGTTGGAAGACTACACCAATTTGTTTGAGGTTGTTCCAATTGTAACTGTGGCTTCCTTGTTGCTTGATGTTGTTTCTTCCACCGAGAAACTCGCCGAATCGATTCAAGAACTATCAAACTTGGCAAAATTTAAGAACAAGGAAAGTAAAGTTGCTGCACAGGATCAAAAGAGTCCTCATCATGAAGAAGTTCCTCAATGTGTTATTACAATTAACCATCTTTCTACAAATTTGACACATAATATTGGGACTTCCTAA 1395 0.2882 MVSQTNPISIRKGWQCLMNWHSEFIANIVNVMLQLKKLGKEDPRRAIHSFKVAFAITLVSSFYYFNSLYHSFGSSAMWAVMTVIVVSEFSVGKFSTLGKGLNRGLATFLAGVLGLGSYYMVHSISRGDHIIEPILLGIIIFLATAGVTYIRFLPQMKARYDYGLLVFILTFCLVSVSSFRDKEILKTAQDRVTTILIGGLISVMVCIFVCPVWAGGDLHNLVSKNIQKLGNFLEGFGDEYFGTLEDGESNKLSMQEYKSVLNSKQVEDNLINFARWEPCHGRFRFQYPWQQYQKIGNLSRQCAYRIDTLNGFLNNFSKTPKEMRSKIQEPCMKMSIETGKALKQLSVSLHKMIPPSAANTHIAASKIAATNLRSMIKTNLLEDYTNLFEVVPIVTVASLLLDVVSSTEKLAESIQELSNLAKFKNKESKVAAQDQKSPHHEEVPQCVITINHLSTNLTHNIGTS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02266 464 Pfam Aluminium activated malate transporter 37 418 IPR020966 GO:0015743
Car01g02266 464 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 17 431 - -
Car01g02266 464 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 17 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02266 Car-Chr1 48404702 48406977 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02266 36 421 Miscellaneous Gene Families AT1G08440 50.128 2.86e-143 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02266 - - aprc:113855925 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02266 01 48404702 48406977 Car01g02266 01 48404702 48406977 ECH
Car01g02266 01 48404702 48406977 Car06g03309 06 62113747 62116388 PCT