Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03291 ATGGCTATGGATTGCGGCATCTATGGCGTCGTCAAGCTCCGCACGTTGTTCATAAGTTTCCTTCTGTTTCTCGCATTTTCTTCATCTTCTTTGTCTTCGACGGTTCAGATTAACTCAAACTCAATCTTGGTGGCTTTACTTGATTCACATTACACAGAACTAGCTGAACTTGTTGAAAAAGCGATGCTGTTACAAACTTTAGAAGACACTGTTGGAAAAAACAACATCACCATTTTCGCACCAAAAAACGAAGCTCTTGAACGAGATCTCGACCCGAACTTCAAAACGTTTCTACTCGAACCGCGTAACCTTAAGTCTCTTCAGACTCTACTCATGTCACACATCATTCCAATCCGAATCACTGGATCCAATTCGGTAACCGGGTCGACCCGACACAAAACGTTGTCGCTTCAGCATAATCTCATTCTAAACGGAACCGGTCAACAATGGACAGTTGACGGCGCTAAGATTCTTCACACCGACGCCGTTACACGACCTGACGGCGTTATCCACGGGATCGAACGCCTTCTCATTCCACGCTCCGTTCAAGATGACTTTAATCGTCGCCGGAGTCTCATCTCCATTGCTGCTATTAAACCTGAGGGAGCGCCGGAGGTTGATCCCAGAACTCACCGGTTAAAAAAACCGGCGCCGCCGCAGGAGGCAGGCTCACCGCCGGTTCTACCAATTTATGACgcacttgctccgggaccttcactagcaccagcgcctgcaccaggacctgGTGGACCCCACCACCACTTCAACGGCGAGGCTCAGGTGAAGGATTTCATCCAAACACTAATCCACTACGGAGGTTACAACGAGATGGCGGATATTCTGGTTAACCTAACATCATTAGCAACGGAAATGAGTCGGTTAGTTTCAGAGGGTTACGTTTTAACCGTTCTAGCACCAAATGATGAAGCTATGGCTAAATTAACCACAGACCAGTTAAGTGAACCGGGTTCACCAGAACAAATCATGTACTATCATTTAATCCCTGAGTATCAAACCGAAGAGAGTATGTATAATGCTGTTAGAAGATTCGGGAAGGTTCGTTATGATACTCTTCGATTGCCTCATAAGGTTGAAGCTCAAGAAGCTGATGGCTCGGTTAAATTCGGCCACGCTGACGGCTCGGCTTATTTGTTTGACCCTGATATTTATACTGATGGAAGGATTTCTGTGCAAGGGATTGATGGGGTTTTGTTTCCACATCAAGAAGGTGAGGTTCTTCCTGATAACACTTTGACCCGTACCCGGATGGGTCAACCCGCTAAGGTTCTTGCTAAGCAAAGAAGAGGAAAATTGCTGGAAACAGCATGCTGGATGCTTGGAACCTTTGGACAGCATTCTAGATTCACCTCTTGTCAATAA 1380 0.4428 MAMDCGIYGVVKLRTLFISFLLFLAFSSSSLSSTVQINSNSILVALLDSHYTELAELVEKAMLLQTLEDTVGKNNITIFAPKNEALERDLDPNFKTFLLEPRNLKSLQTLLMSHIIPIRITGSNSVTGSTRHKTLSLQHNLILNGTGQQWTVDGAKILHTDAVTRPDGVIHGIERLLIPRSVQDDFNRRRSLISIAAIKPEGAPEVDPRTHRLKKPAPPQEAGSPPVLPIYDALAPGPSLAPAPAPGPGGPHHHFNGEAQVKDFIQTLIHYGGYNEMADILVNLTSLATEMSRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGSPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVEAQEADGSVKFGHADGSAYLFDPDIYTDGRISVQGIDGVLFPHQEGEVLPDNTLTRTRMGQPAKVLAKQRRGKLLETACWMLGTFGQHSRFTSCQ 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03291 459 SMART fasc_3 302 407 IPR000782 -
Car06g03291 459 SMART fasc_3 77 180 IPR000782 -
Car06g03291 459 SUPERFAMILY FAS1 domain 240 406 IPR036378 -
Car06g03291 459 ProSiteProfiles FAS1/BIgH3 domain profile. 38 177 IPR000782 -
Car06g03291 459 MobiDBLite consensus disorder prediction 203 256 - -
Car06g03291 459 Pfam Fasciclin domain 284 406 IPR000782 -
Car06g03291 459 Pfam Fasciclin domain 50 179 IPR000782 -
Car06g03291 459 Gene3D FAS1 domain 254 407 IPR036378 -
Car06g03291 459 SUPERFAMILY FAS1 domain 39 180 IPR036378 -
Car06g03291 459 ProSiteProfiles FAS1/BIgH3 domain profile. 261 404 IPR000782 -
Car06g03291 459 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 3 459 IPR044654 -
Car06g03291 459 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 3 459 - -
Car06g03291 459 Gene3D FAS1 domain 42 180 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03291 Car-Chr6 61595358 61600893 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03291 - - gmx:100790599 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02279 01 48566845 48570012 Car06g03291 06 61595358 61600893 PCT