Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03287 ATGGAAGAAACCCTAAGCCCTACTCAGAAACAGAGACTCCCCGTTGCCGCGCGCATTCAATCTCCTACAAGTCCATTCCTTCTAGGTTCCAACGATGATCAGCTCGAACGCGCTCAAGCACGTGCAGCACGCGCCGCTGCTATCCGCCGCAAGAACCTCACCGTTTCCCAATCTCTTGATGCCGATTCCGATCCCTTTCTCAATAAACAGCAAATCTTCGATTTGTTCCAAAACTGCATAAAGCTCGCCAGCGAAAATAAAATTAATCAGAAAAACACGTGGGAGTTAAACTTGATTGATCACCTTACTGATATTATTAAGGCGGAAGAAGAAAATGACACCGAGACTAATTTTCAAAAGGCAAGCTGCACTCTTGAGGCTGGTGTCAAAATTTATTCATTAAGGGTGGATTCAGTTCATTCTGAGGCATATAAAGTCCTTGGTGGGATGAATAGAGCAGGCCAAGAAGATGTGCAAGACACTACCTTGGAGGGTGTTAATGTTGAAACTGGAAAAGAAGGAAGCAGGAAAGAGACAGATAAAAAGTTGTCGCCTTTGTCAACACTGGAACCATCTTTTGAGGTTCTCAATGTAAAGAAGTTTGATGCTGCATTTGTCGTGGACCCACTATATCGCCAGACAACAGCAAAATTTGACGAAGGCGGAGCCAAAGGTCTTTTAATGAACAATCTCGGTGTATATGGTGGATGTAAGGTGCTCTTTGATTCACTAGAAGTTCCTGCAAATTGTATGGCGAGCCAAAATGAACATGATACTTCAGAGACCATTGATCTTTCTTTTGCCAGAGATTGTGTTGAGCAGATGGTTTTGGAGATGCGTGTGAAGGATGAAATTTCTCCAACTCTCAGAACTATAGTAAACCAATTCGATGAAAATAATAAAAGGCCTACTAATTTTCAACTTCATAGCCAGAATTCAAATTCAGTGGAAGAGCTTGATGTTGATTTCAATTGTGAAAATGGGGCTGAGAGAGATGAATATGAGAACTGTGCGACCTGGAATGACGATGATCATGATGACCAAACAGTTGATGCTGATCTAGGCTCTAATGATATAGATCCAAGTTTCCCTAGTTATCCTCAGGAAAATGAGCAATTTCCTTCCACAGACCCTGACATGGATGACAGATTTGAAAATGTTGACGGGTTCTTATCCTTGAGTCTCGGTTTTAGTTCAAAACAAAATGCATGGGCAGGCCCTGATCATTGGAAGTATAAAAAATCCAAAGTCTCTGAGGTTCAACCTACTTCCGAAGATGGGGCAACCCAGAAAACTAGGCACACAAAGAGCAAGAGACAAGCTGAAATTGATTTAGATTTTACAAATTCTCTGGAGAAGAACATGTTGGATATATTTGCGCCTCCCAAGAATCCCAAAACATTACTTCTCCCTGAAAGCAGAGCGCCTTGCAATACAAAACTTCCAGAGGACTGCCACTATCAGCCAGAGGAACTTATCAAGCTATTTCTTCTTCCGGATGTGAAGTGTCTTGGGAGGAGGGTAAAAAGATTCTCAGACGCAGATGGATCTAGAGAACAATGCAATGAGAATGATTTATTCCCTTCTTGGGATAATGGAAGTGCTTGTGGTGACGAGTCTGGTGATTATGGAGGCGATCATCACAGTGACATGGAGGACATTGACACTCTTATTACTCAGCCTCGTCAGGTCAGTAAAATCGAAGTCCAGTACGACAAAACATCCAAACAAGTTGATGTTCAAGCGCTTAAAATTACTCTTTGGGACCATGTTCAAGCATCTACTAAGCTTCCTCCTGTTCAGGGTCAAGAAGAAATAGTATCTTTCAAGAATATATTGGCTAACTTTCCTGGCGAATGCAATGCGGCTGCAAACATCAGTGACATCTCTCCTCATTTGTGCTTCATATGTCTACTGCATTTGGCAAATGAGAAAGGATTGAGCATTCACAGCTTCCCCGACTTGGATGATCTTTCAATACGCTTTCCACATGTTGGTGATGCTATAAGTGAAACAGTAGTTTAG 2025 0.4212 MEETLSPTQKQRLPVAARIQSPTSPFLLGSNDDQLERAQARAARAAAIRRKNLTVSQSLDADSDPFLNKQQIFDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAEEENDTETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQEDVQDTTLEGVNVETGKEGSRKETDKKLSPLSTLEPSFEVLNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYGGCKVLFDSLEVPANCMASQNEHDTSETIDLSFARDCVEQMVLEMRVKDEISPTLRTIVNQFDENNKRPTNFQLHSQNSNSVEELDVDFNCENGAERDEYENCATWNDDDHDDQTVDADLGSNDIDPSFPSYPQENEQFPSTDPDMDDRFENVDGFLSLSLGFSSKQNAWAGPDHWKYKKSKVSEVQPTSEDGATQKTRHTKSKRQAEIDLDFTNSLEKNMLDIFAPPKNPKTLLLPESRAPCNTKLPEDCHYQPEELIKLFLLPDVKCLGRRVKRFSDADGSREQCNENDLFPSWDNGSACGDESGDYGGDHHSDMEDIDTLITQPRQVSKIEVQYDKTSKQVDVQALKITLWDHVQASTKLPPVQGQEEIVSFKNILANFPGECNAAANISDISPHLCFICLLHLANEKGLSIHSFPDLDDLSIRFPHVGDAISETVV 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03287 674 PIRSF Condensin_H 540 664 IPR022816 GO:0000796|GO:0007076
Car06g03287 674 PIRSF Condensin_H 268 550 IPR022816 GO:0000796|GO:0007076
Car06g03287 674 PIRSF Condensin_H 1 271 IPR022816 GO:0000796|GO:0007076
Car06g03287 674 MobiDBLite consensus disorder prediction 415 439 - -
Car06g03287 674 MobiDBLite consensus disorder prediction 164 184 - -
Car06g03287 674 PANTHER CONDENSIN COMPLEX SUBUNIT 2 8 666 - -
Car06g03287 674 MobiDBLite consensus disorder prediction 170 184 - -
Car06g03287 674 Pfam Condensin complex subunit 2 548 661 IPR022816 GO:0000796|GO:0007076
Car06g03287 674 Pfam Condensin complex subunit 2 24 513 IPR022816 GO:0000796|GO:0007076
Car06g03287 674 PANTHER CONDENSIN COMPLEX SUBUNIT 2 8 666 IPR022816 GO:0000796|GO:0007076
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03287 Car-Chr6 61491358 61495794 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03287 K06676 - gmx:100793772 1030.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03287 06 61491358 61495794 Car06g03287 06 61491358 61495794 ECH
Car01g02284 01 48607226 48611544 Car06g03287 06 61491358 61495794 PCT