Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02284 ATGGCAGAAGCCGTAAGCCCTAATCCAACAACGCTTAACAAAAAGAGGCTTCCCATATCCTCCACCAATTTCTTCGTCGCCTCCAATGACGACCGACTTGAACGCGCCGCAGCACGTGCAGCACGTGCCGCCTCCATCCTCCGCACGTCCCGTCCCGTTAACTTCAACTCTCAACCCTCCGATCCCGTTCCATGTCTCAACAAGCACCAGATTCTCGACTTATTCCACAATTGCATTAAGCTTGCATCCGAAAATAAAATTAATCAGAAAAATACATGGGAATTGGATTTGATTGATCACCTTAATGATATTATTAGGGTTGAAGACGATAATAATGCCGAAACTGATTTTCAAATGGCAAGCTGCACTCTTGAAGCTGGAGTCAAAATTTATTCATTAAGGGTGGATTCGGTGTATTCTGAGGCATATAAAGTCCTTTCTAGAATGAATAGGGCAGGCGAAGAAACTCAGCAAGACACTACTCTAGAGAGTGTTAATGCTGAAGGTGGACGAGAAGAAAGCAAGAAGGGAATCACCAAAAAGTTATCACCTTTGTCAACATTGGAATCATCTTTTGAGGTTCTTAATGTAAAGAAGTTTGATGTTGCGTTTGCTGTGGATCCCCTCTATCGCCAAACATCAGCAAAATTTGATGAAGGGGGAGCCAAAGGTCTTTTGATGAATAGCCTCGGTGTATATGGTGGATGTAGGGTGCTCTTTGATTCACTAGAAGTGCCAGGGAAGTATGTAGCAGGTCAACATGAACATGATATTTCAGATATAATTGATCTTTCTTTTGCTAGAGATTGTGTGGAACAGATGGTATTGGATATGCATATTAAGGATGAAATCTCTCCAACTCTCCGTTTGATAGTAAATCAATTTGACGAAAATAGTAGAAGACCCTCTGATTTTCAATTATATGGCCAGAAATCAGCGGAAGAGTTTGATGGAGCTATTGATTGTGAAGTTAGGACTGAAATAGAAGATGAGAACTTCTCGACTTGGCCCTGTGACCATGACAGCCATACTTCACTGGGCTCTAATGATGCTGACCCAAAATTTTCAAGTTACCCTCAGGAGAAAGAACCTTTTCCTTCCCAAGACCCTGATATGGATGAAATATTTGGAAATGTTGATGAGCATCTATTTTTTAGTCTGGGTTTTAGGTCAAAGAAAAATGCATGGGCAGGTCCTGATTATTGGAAGTACCGAAAAGCTAAAGGCACAGAGTCAGAAGTTCTCTGTTCTTCTGAAGATGGGTCAACCCTCACAACTAGGAAGCCAAGGACGATGAGACAGATCGAGGTTGATTTAAATTTCACAAATTCTCTTGAGAAAACACTTCCAGACATCTTTTGTCCTCCCAAGAATCACAAATCATTATTACTCCCTGAAAATAGACCCCATTGTGTTACAAAACTCCCAGAAGACTGCCACTATGAGCCAGAGGATCTTTTGAATTTGTTTCTTTTGCCTAAAGTAAAGTGTCTTGGGAGGAGGTCGATAAAATTATCAGATGGACCGACAGAGCAATGTAATAACGATGAACCTTTCCCTTCCTGGGGTAATGGAAGTGTTTGTGATGGTGACTATGATGGTGCACATAGTGACATGGATGACTCAAGCACACTTATTTCTCAGCCTCGTCAGATCAACAAAATTGAAGTTCAATACGACAAAACGTCCAAACAAGTTGATGTTCAGGCACTGAAACTCTCTCTTTGGAACTCTATTCAAGAAATTCAAGCATCCGTCGAACTTCCTTTTCAGGGTGACAAAGAAATGGTATCTTTCAAGCACATATTGGCCAACTTTCCTAGCGAATGCAATGCTGCTGCAACTGTTACTGACATATCTCCACATTTGTGTTTCATATGCCTATTGCATTTGGCTAATGAGAAAGGGTTGAGCATCCAAAGCTACCCCGACTTAGACGATCTTTGCATATATATGCCTACTTGA 1965 0.4137 MAEAVSPNPTTLNKKRLPISSTNFFVASNDDRLERAAARAARAASILRTSRPVNFNSQPSDPVPCLNKHQILDLFHNCIKLASENKINQKNTWELDLIDHLNDIIRVEDDNNAETDFQMASCTLEAGVKIYSLRVDSVYSEAYKVLSRMNRAGEETQQDTTLESVNAEGGREESKKGITKKLSPLSTLESSFEVLNVKKFDVAFAVDPLYRQTSAKFDEGGAKGLLMNSLGVYGGCRVLFDSLEVPGKYVAGQHEHDISDIIDLSFARDCVEQMVLDMHIKDEISPTLRLIVNQFDENSRRPSDFQLYGQKSAEEFDGAIDCEVRTEIEDENFSTWPCDHDSHTSLGSNDADPKFSSYPQEKEPFPSQDPDMDEIFGNVDEHLFFSLGFRSKKNAWAGPDYWKYRKAKGTESEVLCSSEDGSTLTTRKPRTMRQIEVDLNFTNSLEKTLPDIFCPPKNHKSLLLPENRPHCVTKLPEDCHYEPEDLLNLFLLPKVKCLGRRSIKLSDGPTEQCNNDEPFPSWGNGSVCDGDYDGAHSDMDDSSTLISQPRQINKIEVQYDKTSKQVDVQALKLSLWNSIQEIQASVELPFQGDKEMVSFKHILANFPSECNAAATVTDISPHLCFICLLHLANEKGLSIQSYPDLDDLCIYMPT 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02284 654 MobiDBLite consensus disorder prediction 153 178 - -
Car01g02284 654 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 654 - -
Car01g02284 654 PIRSF Condensin_H 265 543 IPR022816 GO:0000796|GO:0007076
Car01g02284 654 PIRSF Condensin_H 2 269 IPR022816 GO:0000796|GO:0007076
Car01g02284 654 PIRSF Condensin_H 530 653 IPR022816 GO:0000796|GO:0007076
Car01g02284 654 MobiDBLite consensus disorder prediction 338 355 - -
Car01g02284 654 MobiDBLite consensus disorder prediction 333 368 - -
Car01g02284 654 Pfam Condensin complex subunit 2 28 509 IPR022816 GO:0000796|GO:0007076
Car01g02284 654 Pfam Condensin complex subunit 2 536 650 IPR022816 GO:0000796|GO:0007076
Car01g02284 654 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 654 IPR022816 GO:0000796|GO:0007076
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02284 Car-Chr1 48607226 48611544 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02284 K06676 - gmx:100777082 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02284 01 48607226 48611544 Car01g02284 01 48607226 48611544 ECH
Car01g02284 01 48607226 48611544 Car06g03287 06 61491358 61495794 PCT