Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03255 ATGTACATAACAACCTCTTCTCTTCTCCTCAGAACAACAACCAAACCCAAACTTTTTTCTAGAACCTTCTTCGCTTCTCCTCTTTCTCTAACTTCTTACTCATCCCGCAACACTTCTAGATCCTTCTTTTCCTCCATTCCTCGCTTCAACCGCCGCTTCCATTACACCTCATATCGGTCTCTCCGTCCTCACATCTCAGCCGTCACTCCCGGTATCGAACGCTTCCACCGCACGATCGCTACCATGTCTAATGAAAATCCTTTCAAAGGAAACTTGACAAGTCTTCCTAAGCCTGGTGGAGGCGAGTTTGGAAAATTCTACAGTCTCCCTTCTCTCAACGATCCAAGGATTGAAAAGTTACCATACTCCATTAGAATTCTGCTTGAATCTGCCATTCGCAATTGCGACAATTTCCAAGTCACTAAGGAAGATGTTGAAAAGATTATTGACTGGGAAAACACTTCTACTAAGCAAGTTGAGATTCCTTTCAAGCCTGCTCGTGTTCTCTTGCAGGATTTTACTGGAGTGCCAGCTGTTGTCGACTTGGCTTGCATGCGAGATGCTATGAATAAGCTTGGCAGTGATTCAAATAAAATCAATCCTCTGGTTCCTGTTGATCTCGTCGTTGATCATTCAGTTCAAGTTGATGTGGCAAGGTCAGAAAATGCAGTGCAGGCTAATATGGAACTTGAATTCCAGAGAAACAAGGAGAGATTTGCTTTTCTTAAATGGGGATCAACTGCATTCCGTAACATGCTTGTTGTTCCTCCTGGTTCTGGTATAGTACATCAGGTCAATCTTGAATATCTTGGAAGGGTAGTTTTCAACAATGAGGGCTTACTTTATCCTGACAGTGTGGTTGGGACTGATTCGCATACAACCATGATAGATGGGCTTGGTGTTGCTGGATGGGGTGTTGGCGGTATTGAAGCTGAGGCAGCAATGCTTGGTCAGCCTATGAGCATGGTTTTGCCTGGTGTTGTTGGGTTCAAGCTATCAGGAAAACTGCGCAATGGTGTTACAGCAACTGATTTGGTTCTAACTGTGACACAAATTCTTAGAAAGCACGGTGTTGTAGGGAAATTTGTTGAGTTTTATGGTGATGGTATGAGTAAGTTATCTTTAGCTGACAGAGCTACTATTGCTAATATGTCTCCTGAATATGGTGCCACCATGGGCTTCTTCCCTGTGGATCATGTTACATTACAATATCTCAAACTAACCGGAAGAAGCGATGAGACTGTGGCAATGATAGAGTCTTATCTCAGAGCAAACAAACTGTTTGTTGATTATAATGAGCCGCAACAAGATAGAGTATATTCATCATATCTTGAATTAAACCTGTCCGAGGTTGAGCCATGTATCTCAGGACCAAAGAGACCCCATGACCGGGTGCCTTTGAAAGAAATGAAGGCTGACTGGCACGCTTGTCTTGATAACAAAGTTGGATTTAAGGGATTTGCTATACCAAAAGAGGCACAGGAAAAAGTTGCAAAATTTGATTTTCATGGGCAGCCAGCAGAGCTCAAGCATGGCAGTGTAGTGATTGCTGCAATCACAAGTTGTACAAATACATCAAACCCAAGTGTTATGCTTGGGGCTGGTCTTGTTGCGAAAAAGGCTCATGAGCTTGGTTTGCGGATCAAGCCTTGGGTTAAAACAAGTCTTGCTCCAGGCTCTGGAGTTGTTACTAAATATCTACTCCAGAGTGGACTGCAAAAATATCTTAATGAACAAGGCTTTCATATTGTTGGATTTGGCTGTACAACATGTATTGGCAATTCAGGGGATCTGGATGAATCTGTTGCTTCTGCCATCTCAGAAAATGACATTGTAGCAGCTGCCGTGTTGTCTGGGAATCGTAATTTTGAGGGCCGGGTTCATCCCTTGACAAGAGCTAATTATCTTGCCTCACCTCCTCTGGTTGTTGCTTATGCTCTTGCTGGCACGGTTGACATTGACTTTGAGAAGGAGCCAATTGGGACGGGGAAGGATGGCAAGAATGTCTTCCTGAGGGATATCTGGCCATCTACCGAAGAAATTGCAGAGACTGTTCAATCTAGCGTGTTGCCTGAGATGTTCCGAAGTACATATGAGGCTATTACAAAAGGCAACCCTATGTGGAATCAACTTCAAGTTCCAGCAAACACTCTCTACTCTTGGGACTCCAACTCAACATATATTCACGAACCTCCATACTTCAAGAACATGACCATGGATCCTCCTGGACCTCATGGCGTGAAAGATGCCTATTGTTTGCTAAACTTTGGTGACAGTATAACCACTGATCATATTTCTCCTGCTGGAAGCATTAACAAGGACAGTCCTGCTGCTAAATACCTCCTAGAGCGTGGGGTTGAACGCAAGGACTTCAATTCTTATGGAAGTCGTCGTGGTAATGATGAGGTGATGGCGAGGGGAACTTTTGCCAACATTCGCCTTGTTAACAAACTCTTAAACGGGGAAGTTGGCCCTAAGACAGTTCACATTCCAACTGGGGATAAGCTTTATGTGTTTGATGCAGCAATGAGATACATGACTTCTGGGCAAGACACCATTGTTCTGGCTGGAGCTGAATATGGCAGTGGAAGTTCTAGAGATTGGGCTGCCAAGGGTCCAATGTTATTGGGGGTGAAAGCTGTGATAGCTAAAAGTTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTATCCCTCTATGCTACAAATCGGGGGAGGATGCTGACACATTAGGATTGACTGGTCATGAACGTTATACAATTGATCTTCCAAGTAAAATCAGTGAGATCAGGCCTGGCCAAGATGTCAAAGTCACAACTGATAATGGAAAATCTTTCACCTGCATAGTACGCTTTGACACTGAGGTGGAACTTGCTTACTTCAACCATGGAGGCATTCTTCCATATGTCATACGTAACCTCATTAAGCAGTGA 2940 0.4378 MYITTSSLLLRTTTKPKLFSRTFFASPLSLTSYSSRNTSRSFFSSIPRFNRRFHYTSYRSLRPHISAVTPGIERFHRTIATMSNENPFKGNLTSLPKPGGGEFGKFYSLPSLNDPRIEKLPYSIRILLESAIRNCDNFQVTKEDVEKIIDWENTSTKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVVDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSTAFRNMLVVPPGSGIVHQVNLEYLGRVVFNNEGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRNGVTATDLVLTVTQILRKHGVVGKFVEFYGDGMSKLSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMIESYLRANKLFVDYNEPQQDRVYSSYLELNLSEVEPCISGPKRPHDRVPLKEMKADWHACLDNKVGFKGFAIPKEAQEKVAKFDFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKAHELGLRIKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGFGCTTCIGNSGDLDESVASAISENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGTGKDGKNVFLRDIWPSTEEIAETVQSSVLPEMFRSTYEAITKGNPMWNQLQVPANTLYSWDSNSTYIHEPPYFKNMTMDPPGPHGVKDAYCLLNFGDSITTDHISPAGSINKDSPAAKYLLERGVERKDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHIPTGDKLYVFDAAMRYMTSGQDTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCYKSGEDADTLGLTGHERYTIDLPSKISEIRPGQDVKVTTDNGKSFTCIVRFDTEVELAYFNHGGILPYVIRNLIKQ 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03255 979 PANTHER ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER 53 979 IPR006249 -
Car06g03255 979 PANTHER ACONITATE HYDRATASE 53 979 - -
Car06g03255 979 Gene3D Aconitase, domain 3 454 677 IPR015931 -
Car06g03255 979 Pfam Aconitase C-terminal domain 778 905 IPR000573 -
Car06g03255 979 ProSitePatterns Aconitase family signature 1. 514 530 IPR018136 -
Car06g03255 979 SUPERFAMILY LeuD/IlvD-like 718 977 - -
Car06g03255 979 CDD AcnA_IRP 167 651 - -
Car06g03255 979 ProSitePatterns Aconitase family signature 2. 580 593 IPR018136 -
Car06g03255 979 TIGRFAM aconitase_1: aconitate hydratase 1 104 977 IPR006249 -
Car06g03255 979 CDD AcnA_IRP_Swivel 755 925 IPR044137 -
Car06g03255 979 Gene3D Aconitase, domain 4 742 978 IPR015928 -
Car06g03255 979 Gene3D - 678 739 - -
Car06g03255 979 PRINTS Aconitase family signature 228 241 IPR001030 -
Car06g03255 979 PRINTS Aconitase family signature 252 260 IPR001030 -
Car06g03255 979 PRINTS Aconitase family signature 281 294 IPR001030 -
Car06g03255 979 PRINTS Aconitase family signature 295 310 IPR001030 -
Car06g03255 979 PRINTS Aconitase family signature 357 370 IPR001030 -
Car06g03255 979 PRINTS Aconitase family signature 371 384 IPR001030 -
Car06g03255 979 PRINTS Aconitase family signature 453 467 IPR001030 -
Car06g03255 979 PRINTS Aconitase family signature 518 529 IPR001030 -
Car06g03255 979 PRINTS Aconitase family signature 580 593 IPR001030 -
Car06g03255 979 Gene3D Aconitase, domain 3 85 453 IPR015931 -
Car06g03255 979 SUPERFAMILY Aconitase iron-sulfur domain 100 714 IPR036008 -
Car06g03255 979 Pfam Aconitase family (aconitate hydratase) 146 649 IPR001030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03255 Car-Chr6 60358757 60367790 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03255 K01681 - gmx:100793264 1783.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03255 06 60358757 60367790 Car06g03255 06 60358757 60367790 ECH
Car01g02300 01 48818406 48826928 Car06g03255 06 60358757 60367790 PCT