Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03253 ATGGATGAACCTTTTCTAGCTCTTAATGATTCAACACCACAACAACCATCTTCAATATTCACTCATTCATTTGGTTCAAAACATGAATCAGATGGTGAACTTGAACGAATACTCTCAGATACAAATGTTCCTTTTGTGAAACGTATTCCACTTGCTACATGGGTTGAACTCAAATTACTCTTTTACCTTGCTGCCCCTGCTGTTATTGTTTACCTTATCAACTATGTCATGTCTATGTCTACTCAAATATTTTCGGGGCATCTTGGTACTTTGGAACTTGCTGGTGCTTCACTTGGAAATACTGGTATTCAAATCTTTGCTTATGGACTCATGTTGGGCATGGGGAGTGCTGTTGAGACACTATGTGGACAAGCATTTGGTGCAAAAAAATATGACATGTTAGGCATATATTTACAAAAATCATCAGTGCTTCTCACATTAGCTGGTTTAATTTTGACTCTCATATACATTTTCTCCAAACCAATTTTAATCTTCATAGGACAATCTCCAGCAATTGCATCAGCAGCAGCACTTTTTGTGTATGGTCTAATCCCACAAATATTTGCCTATGCTATAAACTTTCCAATACAAAAATTTCTTCAAGCACAAAGCATAGTGGCTCCAACAGGAACATTGGTTATTCACCTTATATTAAGTTGGGTTGCTGTATATAAAATTGGGCTTGGTTTATTGGGTGCATCATTGGTTTTGAGTTTGTCTTGGTGGATAATTGTGATTGGACAATTTGTGTATATTGTGAAGAGTGAAAAGTGTAAGGAAACATGGAAAGGGTTTAGTTATCAAGCATTTACAGGGTTGCCAGAGTTTTTCAAATTGTCAGCTGCATCAGCTGTGATGTTGTGCTTAGAGACTTGGTACTTTCAAATCTTGGTTTTGCTTGCAGGGTTACTTCCTGATCCTGAAATTGCTCTTGATTCCCTTTCTATTTGTACCACTGTGTCTGGATGGGTGTTCATGATCTCAGTTGGATTTAACGCAGCTGCAAGTGTGAGAGTGAGCAATGAATTAGGAGCCAAAAATCCAAAATCAGCCTCATTTTCTGTGGTGGTGGTGACAGTGATTTCTTTCATAATATCAGTGATTTTAGCTCTTGTGGTGATTGCATTAAGGGATGTGATTAGTTATGTCTTCACAGAGGGTGAAGATGTTGCCGCTGCTGTCTCAGATCTCTGTCCTCTCCTTGCTCTTTCTATTACTCTCAATGGCGTTCAGCCTGTTTTATCTGGTGTGGCCGTTGGATGTGGATGGCAAACTTTCGTTGCATATGTAAATGTTGGGTGTTATTATGGAATTGGAATACCGTTGGGGGCAGTTCTCGGTTTCTATTTCAAACTTGGTGCAAAGGGAATATGGTTGGGAATGCTAGGTGGCGTGATTATGCAAACAATTATTCTATTGTGGGTTACATTTCGAACTGATTGGAATAAAGAGGTTGAAGAATCAAATAAGAGGCTGAACAAGTGGGAGGACAGGACCGAGACACTCATTAAAGAGTGA 1518 0.3906 MDEPFLALNDSTPQQPSSIFTHSFGSKHESDGELERILSDTNVPFVKRIPLATWVELKLLFYLAAPAVIVYLINYVMSMSTQIFSGHLGTLELAGASLGNTGIQIFAYGLMLGMGSAVETLCGQAFGAKKYDMLGIYLQKSSVLLTLAGLILTLIYIFSKPILIFIGQSPAIASAAALFVYGLIPQIFAYAINFPIQKFLQAQSIVAPTGTLVIHLILSWVAVYKIGLGLLGASLVLSLSWWIIVIGQFVYIVKSEKCKETWKGFSYQAFTGLPEFFKLSAASAVMLCLETWYFQILVLLAGLLPDPEIALDSLSICTTVSGWVFMISVGFNAAASVRVSNELGAKNPKSASFSVVVVTVISFIISVILALVVIALRDVISYVFTEGEDVAAAVSDLCPLLALSITLNGVQPVLSGVAVGCGWQTFVAYVNVGCYYGIGIPLGAVLGFYFKLGAKGIWLGMLGGVIMQTIILLWVTFRTDWNKEVEESNKRLNKWEDRTETLIKE 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03253 505 Pfam MatE 66 209 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car06g03253 505 Pfam MatE 283 444 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car06g03253 505 PANTHER MULTIDRUG RESISTANCE PROTEIN 13 492 - -
Car06g03253 505 PANTHER PROTEIN DETOXIFICATION 13 492 - -
Car06g03253 505 Coils Coil 478 505 - -
Car06g03253 505 TIGRFAM matE: MATE efflux family protein 66 458 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car06g03253 505 CDD MATE_eukaryotic 56 487 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03253 Car-Chr6 60325653 60336246 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03253 K03327 - gmx:100801718 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03253 06 60325653 60336246 Car06g03253 06 60325653 60336246 ECH
Car01g02303 01 48845463 48849590 Car06g03253 06 60325653 60336246 PCT