Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02303 ATGGGATCGGTGAACAAAAACGGCAATGAGGAACCACTTTTGTTATCCAACAACATCGGTAAGCCAAATCTCCACGAATCTGACGGCGAGTTGGAGAGACTTTTATCGGACACCACCGTGCCATTTCTCCGCCGTGTCGGCTCAGCCACGTGGATTGAGCTTAGACTTCTGTTCTTTTTAGCTGCTCCAGCTGTCTTCGTTTACCTAATTAACTATGTCATGTCTATGTCCACACAAATCTTCTCCGGCCACCTTGGTAACCTTGAACTCGCCGCTGCTTCCCTCGGCAATACCGGAATTCAAATGCTTGCTTATGGCCTCATGTTAGGAATGGGGAGTGCGGTTGAGACACTATGTGGACAAGCATTTGGAGCAGAAAAGTTTGAAATGTTGGGAACATATTTACAAAGATCAACTATTCTTCTAACTATAGCTGGTTTATTTCTCACTGTTATTTATGTCTTAAGCGAACCCATTCTTATTTTTATTGGACAATCTCCAACAATCGTGTCTGCAGCAGCGGTTTTTGTCTACGGGCTTATCCCACAAATATTCGCTTATGCTGTTAATTTTCCAATTCAGAAATTTCTTCAAGCACAGAGTATAATTTTCCCAAGTGCGTATATTTCAGCAGCCACGTTGGTGGTTCATCTTGTGCTTAGTTATGTTGTTGTGTATAAGATTGGTTTGGGCATATTGGGCGCATCTTTGGTTTTGAGTTTATCATGGTGGATTATTGTTGTGGCCCAATTTGTTTATATTGTAAAGAGTGACAGGTGTAAGTACACGTGGCGTGGCTTCACTTGGGAAGCGTTTTCTGGCTTGCCTGAGTTTTTTAAGTTGTCGGCGGCTTCAGCTGTTATGTTATGCCTTGAGGCTTGGTACTTTCAGATTTTGGTTTTGTTGGCTGGGCTTCTTCCGCAACCTGAGTTGGCTCTTGACTCTCTTTCTATTTGTACGACTGTTAATGGGTGGGTGTTCATGATCTCTGTTGGATTCAACGCAGCTGCAAGCGTGAGGGTGAGCAACGAACTAGGAGCAAGAAATCCAAAATCAGCATCATTTTCAGTGAAAGTGGTGACATTGATATCATTCATAATATCAGCAATAGCAGCATTAATTGTGCTTGCGTTGCGTGATGTTATTAGCTATGTTTTCACTGAAGGTGAAACTGTCGCTGCTGCTGTCTCTGATCTTTGCCCACTTCTCTCTCTTTCTATTCTCCTCAACGGCATTCAACCCGTCTTATCTGGGGTGGCTGTTGGGTGTGGATGGCAAGCTTTTGTTGCTTATGTGAATGTCGCTTGTTATTATGGAGTTGGCATACCTTTGGGGGCTGTTCTCGGCTTTTACTTCCAATTTGGTGCCAAGGGAATATGGCTAGGAATGCTTGGTGGAACCACTATGCAGACAATTATTCTAATTTGGGTCACATTTAGAACGGATTGGAACAAGGAGGTGGAAGAATCAGCCAAGAGGTTGAACAAATGGGACGACAAAAAGGAACCCCTTCTTCTAAACTAG 1524 0.4344 MGSVNKNGNEEPLLLSNNIGKPNLHESDGELERLLSDTTVPFLRRVGSATWIELRLLFFLAAPAVFVYLINYVMSMSTQIFSGHLGNLELAAASLGNTGIQMLAYGLMLGMGSAVETLCGQAFGAEKFEMLGTYLQRSTILLTIAGLFLTVIYVLSEPILIFIGQSPTIVSAAAVFVYGLIPQIFAYAVNFPIQKFLQAQSIIFPSAYISAATLVVHLVLSYVVVYKIGLGILGASLVLSLSWWIIVVAQFVYIVKSDRCKYTWRGFTWEAFSGLPEFFKLSAASAVMLCLEAWYFQILVLLAGLLPQPELALDSLSICTTVNGWVFMISVGFNAAASVRVSNELGARNPKSASFSVKVVTLISFIISAIAALIVLALRDVISYVFTEGETVAAAVSDLCPLLSLSILLNGIQPVLSGVAVGCGWQAFVAYVNVACYYGVGIPLGAVLGFYFQFGAKGIWLGMLGGTTMQTIILIWVTFRTDWNKEVEESAKRLNKWDDKKEPLLLN 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02303 507 PANTHER MULTIDRUG RESISTANCE PROTEIN 24 494 - -
Car01g02303 507 PANTHER PROTEIN DETOXIFICATION 24 494 - -
Car01g02303 507 CDD MATE_eukaryotic 53 489 IPR045069 GO:0042910|GO:1990961
Car01g02303 507 TIGRFAM matE: MATE efflux family protein 63 460 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car01g02303 507 MobiDBLite consensus disorder prediction 1 21 - -
Car01g02303 507 Pfam MatE 63 223 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car01g02303 507 Pfam MatE 285 446 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02303 Car-Chr1 48845463 48849590 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02303 K03327 - gmx:100801718 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02303 01 48845463 48849590 Car01g02303 01 48845463 48849590 ECH
Car01g02303 01 48845463 48849590 Car06g03253 06 60325653 60336246 PCT