Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03191 ATGGCCGCCGTAACTTCTTCTTTCTCTCTCTCAACACTCACTCAGTCTTCTCAAAGGAAGCTTACTCTTTCTTCATCCCCTCGCTTCGTGAattccgattcagattcatttcgattccgtttgagcttcTCGTCTCACTGTGTTGGACTACGAGCTTCGAATTCCGTTTCCAAAATGGTCGTTCGGTGCTCCTCTTCTGTGTCAGACCCTCCAACTGTTTCTGAGACAAAGTTAAATTTTCTCGAGGCATATAAGCGACCAATACCGAGTATCTACAACTCCGTGCTTCAAGAGCTTATAGTCCAGCAACATCTGATGAGATACAAGAGATCATACACCTATGATCCTGTATTTGCTCTTGGCTTTGTCACTGTATATGACCAACTCATGGAAGGGTATCCTAGTGATGAGGATAGAGATGCTATCTTCAAAGCATACATTAAGGCGTTGAACGAAGATCCAGACCAATACAGAGTAGATGCTCAGAAGTTGGAAGAGTGGGCTCGTGGTCAAAATTCGACTTCCTTGATTGAGTTTTCATCCAGAGAAGGAGAAGTTGAGGGGGTTTTAAAGGATATTGCTGAAAGAGCAGGCGGAAAGGGGGATTTCAGTTATAGTCGTTTCTTTGCAGTAGGCCTTTTTCGCCTTCTGGAGTTGGCAAATGCAATGGAACCAACAATTTTGGAAAAGCTTTGTGGAGCTTTGAATATCAACAAAAGAAGTGTGGATCGGGACTTGGACGTGTATCGCAATCTACTTTCTAAGTTGGTTCAAGCTAAAGAGCTGCTGAAGGAATATATTGACAGGGAGAAGAAGAAAAGAGAAGAAAGGGCTGAACCACAACAGGCTAATGAGGCCATTACAAAATGTGTGGGACAAGAGCAATTTTCTGACATGATCACCCGGTAA 909 0.4169 MAAVTSSFSLSTLTQSSQRKLTLSSSPRFVNSDSDSFRFRLSFSSHCVGLRASNSVSKMVVRCSSSVSDPPTVSETKLNFLEAYKRPIPSIYNSVLQELIVQQHLMRYKRSYTYDPVFALGFVTVYDQLMEGYPSDEDRDAIFKAYIKALNEDPDQYRVDAQKLEEWARGQNSTSLIEFSSREGEVEGVLKDIAERAGGKGDFSYSRFFAVGLFRLLELANAMEPTILEKLCGALNINKRSVDRDLDVYRNLLSKLVQAKELLKEYIDREKKKREERAEPQQANEAITKCVGQEQFSDMITR 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03191 302 Coils Coil 302 302 - -
Car06g03191 302 Hamap Protein Thf1 [thf1]. 67 275 IPR017499 GO:0010207|GO:0015979
Car06g03191 302 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 288 IPR017499 GO:0010207|GO:0015979
Car06g03191 302 TIGRFAM PS_II_psb29: photosystem II biogenesis protein Psp29 69 274 IPR017499 GO:0010207|GO:0015979
Car06g03191 302 Coils Coil 249 279 - -
Car06g03191 302 Pfam Thylakoid formation protein 72 277 IPR017499 GO:0010207|GO:0015979
Car06g03191 302 PANTHER PHOTOSYSTEM II BIOGENESIS PROTEIN 1 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03191 Car-Chr6 58826727 58831877 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03191 - - aip:107632658 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03191 06 58826727 58831877 Car06g03191 06 58826727 58831877 ECH
Car01g02358 01 49395083 49403945 Car06g03191 06 58826727 58831877 PCT