Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03168 ATGAGAATAACATACATAGTGCATATAAAAATTATACGTTCTGGAACCACAGAGGGGAGGCAGAAATTCGTACCCTTTACTCAACACAGCGCTCAAACCACGCTTCAAATTTTCACTTTATCAGCAGCCTATAGATCAAGAGTTTATCCCATAAGGGAAGGAGGAAGGATTCTAGAATTCATATATGGCAGCAACTGTTTCAAAACAAAAGGAAATTTAACAGTAGGAACAGCCACAACACATTGCTATGCAAGTGAAGAATTCAAAACAAAAAACCACAAAACAAACTCATTAAGTTGCAGCCCTCAAGAAGTAATTTTTAGTGGTGACTATAAACAATCCACATATTGCCACCTTCTTCTAGGCCTATTCTATTCAAATCAAGTTGAATTTATCACCTCAGCTTTTGTCTACACCATGGTACAAGCTTTCACCAATTTTGAAGAACTTTGGAGAGAAATTTGCAATGACATTAAAAATGGAACTCTAAGTTCAAGAATTAAGTCACCAAAAATGAGAGAAGCAATTTTGGACATTATTTCTAAATGTCCAAACACAAATTTGGGTTCAAAATTAGAAGCTTATTGTGAGGAGTTAGAGAAAGTTGATTGGTTTGGTTTGGTTCCAAAACTTTGGCCAAATGTTAAGTATTTGTGTTCAATAATGACAGGATCTATGACACCATATTTGAAAAAACTTAGGCATTATGCAAATGGGTTGCCTTTGATTAGTGGTGATTATGGATCAACTGAGAGCTGGATTGGGGTTAATGTTGATCCTTGTTTGCCTCCTGAAGAAGTTACATTTGTTGTTGTGCCTACTTTCTCTTACTTTGAGTTCATACCTCTTCATAGAAATCAATATGAGATTTGTGATGATTTCTTGGAAGACAAGGCAATTCCACTATCCAAGGTTGTGGTTGGACAACAATATGAAATTGTGCTCACAACTTTTACAGGATTGTACCGATGCAGATTAGGAGATGTAGTAGAAGTGGCAGAGTTTCACAATGGGACCCCAAAATTGAACTTTATATGCAGAAGAAAGCTAATTCTAACAATAAACATAGACAAAAATACAGAGAAGGACCTTCAACTAGTGGTAGAAAGAGGGTCACAAATTCTAAATAAAGCAAAGGCAGAGGTTGTTGATTTTACTAGCTACGCGGATGTCACAAACCAACCGGGACATTATGTTATTTATTGGGAGGTCAAAGGTGAGGTTGAGGACAATGTTTTTTATGCTTGTTGTAGGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAAATGGACCTATCTTTTGTGGATCATGGGTATGTGGTTTCAAGAAAAACCAATTCAATTGGCCCTTTAGAACTTTGCATTTTGGAGAGAGGGACTTTCAAGAAGATTTTGGACAATTTCATAGCTAA 1416 0.3566 MRITYIVHIKIIRSGTTEGRQKFVPFTQHSAQTTLQIFTLSAAYRSRVYPIREGGRILEFIYGSNCFKTKGNLTVGTATTHCYASEEFKTKNHKTNSLSCSPQEVIFSGDYKQSTYCHLLLGLFYSNQVEFITSAFVYTMVQAFTNFEELWREICNDIKNGTLSSRIKSPKMREAILDIISKCPNTNLGSKLEAYCEELEKVDWFGLVPKLWPNVKYLCSIMTGSMTPYLKKLRHYANGLPLISGDYGSTESWIGVNVDPCLPPEEVTFVVVPTFSYFEFIPLHRNQYEICDDFLEDKAIPLSKVVVGQQYEIVLTTFTGLYRCRLGDVVEVAEFHNGTPKLNFICRRKLILTINIDKNTEKDLQLVVERGSQILNKAKAEVVDFTSYADVTNQPGHYVIYWEVKGEVEDNVFYACCREXXXXXXXXXXGNGPIFCGSWVCGFKKNQFNWPFRTLHFGERDFQEDFGQFHS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03168 471 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.10 12 420 - -
Car06g03168 471 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 12 420 IPR004993 -
Car06g03168 471 Pfam GH3 auxin-responsive promoter 14 419 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03168 Car-Chr6 58133389 58142096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03168 11 410 EF-hand Containing Proteins AT1G23160 35.162 3.52e-79 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03168 K14487 - gmx:100813472 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02377 01 49547753 49554189 Car06g03168 06 58133389 58142096 PCT