Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02377 atggaaagcagcaatgtcaacattgaatgtgataacatcctTACTTGGTTTGAAGATGTATCAAAGAATGCTAGTTCAGTCCAAACTCAAATACTATGCAAGATTTTGAAACAGAACAATGAGGTTGAATATTTGAAAAAATGGTTTGGGAGCTACAATGTTCAAGATATGGATGCATGTGCATTGGAATCTCTTTTCACTAGTGTGGTTCCTCTAGCTTCTCATGCTGATTTTGATCCATTTATCCAAAGAATTGCTCTTTCCTTAAGCTCTGGAACCACAGAAGGAAGACAAAAGTTCGTGGCCTTTACCCGCCATAGCGCACAAACTACCCTTCAAATTTTCACTTTAGCAGCAGCCACCAGATCAAAGATTTATCCGACAAAAGAAGGAGGAAGGATTCTTGAATTCATATATAGTAGCAATCAATACAAAACAAAAGGAGGATTAACAGTAGGAACAGCCACAACACACTATTATGCAAGTGAAGAGTTCAAAATCAAACAAGAGAAAACAAAGTTATTTAATTGTAGCCCTTACCAAGTAATTTCAAGTGGTGACTATAAACAAACAACATATTGTCACCTTCTTCTAGGTCTCTTTTTCTCTAATGAAGTTGAATTTATTTCCTCAGCTTTTGTGTATGGGATAGTACAAGCTTTTTGCACTTTAGAAGAGCTTTGGAGGGAAATATGCAATGACATTAGATATGGTACTCTAAGTTCAAAAATAAAATTACCTAAAATGCGAGAAGGTGTTTTGAGTATCATCTCATCGAATTCGAACCCGTTTTTGGCTTCGAAATTAGAAGCTACTTGTAAGGAGTTAGAATTGGTGGATTGGTTTGGTTTGGTTCCAAAACTTTGGCCAAATGCAAAGTACATATATTCCATAATGACGGGTTCTATGTTACCATATTTGAAAAAAGTTAGGCATTATGCAAAGGGGGTGCCATTAGTAAGTGGTGATTATGGTTCAACTGAGAGCTGGATTGGTGTTAATGTGGATCCTATTTTGCCTCCAGAGAATGTTACATTTGCTGTTGTACCCACTTTCTCTTACTTTGAGTTCATACCACTTTATAGACACAAACAAGATTTCTCATTTGTTCATGATGATTTCATGGAAGACAAACCAATTCCACTATCCAAGGTTCAAATTGGACAAGAGTACGAAATAGTTCTCACAACTTTCACAGGGCTATATAGATACAGATTAGGAGATGTGGTGGAAGTGACTGGTTTCCACAATGGGACACCAAAATTGAACTTTATATGTAGAAGAAAACTTATTCTAACAATTAATGTAGACAAGAATACAGAGAAGGACCTTCAAATAGTGGTAGAGAAAGGTTCACAAGTTCTTAACAAGGCCAAAACTGAGCTTGTTGATTTCACAAGTTATGCAAACATGTCAAACTCAAATCAACCAGGATTCTATGTCATTTTTTGGGAAATCAAAGGAGAGGCAGAGGACAAAGTACTCGAAGCGTGTTGCACCGAAATCGACGCGGCTTTTGTCGATCACGGCTACGTCGTTTCGAGGAAAACCAATTCAATAGGGCCATTGAAGCTTTGTATTGTAGAGAAAGGAACATTTAAGAAGATTTTAGATCATTTTGTTGCAAATGGGGGAGCATTGGGCCAGTTCAAAACTCCTAGGTGCACCAACAACCCCATGCTACTTGAAATTCTTAATGCATGCACCATTAAAACGTTTTGTAGTAATGCTTATGATTCAACCCAACCATGA 1752 0.3636 MESSNVNIECDNILTWFEDVSKNASSVQTQILCKILKQNNEVEYLKKWFGSYNVQDMDACALESLFTSVVPLASHADFDPFIQRIALSLSSGTTEGRQKFVAFTRHSAQTTLQIFTLAAATRSKIYPTKEGGRILEFIYSSNQYKTKGGLTVGTATTHYYASEEFKIKQEKTKLFNCSPYQVISSGDYKQTTYCHLLLGLFFSNEVEFISSAFVYGIVQAFCTLEELWREICNDIRYGTLSSKIKLPKMREGVLSIISSNSNPFLASKLEATCKELELVDWFGLVPKLWPNAKYIYSIMTGSMLPYLKKVRHYAKGVPLVSGDYGSTESWIGVNVDPILPPENVTFAVVPTFSYFEFIPLYRHKQDFSFVHDDFMEDKPIPLSKVQIGQEYEIVLTTFTGLYRYRLGDVVEVTGFHNGTPKLNFICRRKLILTINVDKNTEKDLQIVVEKGSQVLNKAKTELVDFTSYANMSNSNQPGFYVIFWEIKGEAEDKVLEACCTEIDAAFVDHGYVVSRKTNSIGPLKLCIVEKGTFKKILDHFVANGGALGQFKTPRCTNNPMLLEILNACTIKTFCSNAYDSTQP 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02377 583 Pfam GH3 auxin-responsive promoter 16 558 IPR004993 -
Car01g02377 583 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.10 8 578 - -
Car01g02377 583 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 8 578 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02377 Car-Chr1 49547753 49554189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02377 17 575 EF-hand Containing Proteins AT1G23160 33.844 1.10e-108 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02377 K14487 - gmx:100814683 947.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02377 01 49547753 49554189 Car01g02377 01 49547753 49554189 ECH
Car01g02377 01 49547753 49554189 Car06g03168 06 58133389 58142096 PCT