Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02520 ATGACAGAGACACACAACAAAACCGTCGTGACGTGGCGCAACATTCCCAACTTAAAATCCTCCTTCAACGACGTCGTTTCACCCAACAACCACCTCTCCAACGACGCCGTTTTCACTTTCACCAACGAAAATGCCATTCCTTCTAAATTCGCCACCGTCTCCGCATCGCGAACGAAACCGAACAAAGAGTTCATTCCCACGGCGGCTCAGCTTCTAAACAACCCGCTCGCCGTTATCGCACTTGTTCCTAAAGATGCCGCTCTGTTTTTCGCCGGAGCTGTTGCCGGTGCCGCCGCTAAGAGCGTCACTGCTCCCCTTGACCGCATCAAGCTTCTCATGCAGACTCATGGAGTGCGAATTGGACAAGAAACTGCGAAGAAAACTATTGGTTTAATAGAGGCAATAACGATGATAGGGAAGGAAGAAGGCATTAGAGGTTACTGGAAGGGTAACCTACCACAGGTGATTAGGGTTATACCTTATAGTGCTGTCCAGCTCTTTGCTTATGAATTTTATAAGAAAATATTTAAGGATAAAAATGGTGAGCTCTCTGTTGTGGGAAGACTTGCAGCAGGTGCTTTTGCGGGCATGACATCAACTTTTGTAACTTATCCATTAGATGTCCTGAGATTACGATTAGCTGTTGAACCTGGGTGTCGAACAATGTCAGAGGTCGCCTTGGGCATGTTAAGAGAGGAAGGTTTTGCATCTTTCTACTATGGCCTTGGGCCTTCTCTTATTGGAATAGCTCCATATATTGCAGTTAACTTTTGTGTTTTTGACTTACTAAAGAAATCGTTGCCAGAGAAATATCAGAAGAGAACCGAAACATCTATAGTCACCGCCGTGCTTTCAGCATCTCTTGCCACAGTTACATGCTATCCTCTGGACACAGTTCGACGACAGATGCAACTGAAGGGAACACCTTATAAGACAGTATTAGATGCCATTTCAGGTATTGTGGCACAGGATGGAGTTATTGGCTTGTACCGGGGATTCGTGCCCAATGCTTTAAAAAACCTACCAAACAGCAGCATCAGGCTTACCACATACGACATTGTCAAACGCCTGATTGCAGCTAGTGAGAAAGAGTTTCAAACAATTGTTGACGAAAACCGCAACAGACTAAAGAAACATACATAG 1143 0.4514 MTETHNKTVVTWRNIPNLKSSFNDVVSPNNHLSNDAVFTFTNENAIPSKFATVSASRTKPNKEFIPTAAQLLNNPLAVIALVPKDAALFFAGAVAGAAAKSVTAPLDRIKLLMQTHGVRIGQETAKKTIGLIEAITMIGKEEGIRGYWKGNLPQVIRVIPYSAVQLFAYEFYKKIFKDKNGELSVVGRLAAGAFAGMTSTFVTYPLDVLRLRLAVEPGCRTMSEVALGMLREEGFASFYYGLGPSLIGIAPYIAVNFCVFDLLKKSLPEKYQKRTETSIVTAVLSASLATVTCYPLDTVRRQMQLKGTPYKTVLDAISGIVAQDGVIGLYRGFVPNALKNLPNSSIRLTTYDIVKRLIAASEKEFQTIVDENRNRLKKHT 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02520 380 PANTHER ADP/ATP CARRIER PROTEIN 7 370 - -
Car06g02520 380 PRINTS Mitochondrial carrier protein signature 88 101 IPR002067 GO:0055085
Car06g02520 380 PRINTS Mitochondrial carrier protein signature 101 115 IPR002067 GO:0055085
Car06g02520 380 PRINTS Mitochondrial carrier protein signature 150 170 IPR002067 GO:0055085
Car06g02520 380 PRINTS Mitochondrial carrier protein signature 198 216 IPR002067 GO:0055085
Car06g02520 380 PRINTS Mitochondrial carrier protein signature 239 257 IPR002067 GO:0055085
Car06g02520 380 PRINTS Mitochondrial carrier protein signature 282 304 IPR002067 GO:0055085
Car06g02520 380 PANTHER SOLUTE CARRIER FAMILY 25 7 370 - -
Car06g02520 380 Pfam Mitochondrial carrier protein 278 359 IPR018108 -
Car06g02520 380 Pfam Mitochondrial carrier protein 88 179 IPR018108 -
Car06g02520 380 Pfam Mitochondrial carrier protein 182 269 IPR018108 -
Car06g02520 380 Gene3D Mitochondrial carrier domain 86 358 IPR023395 -
Car06g02520 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 183 266 IPR018108 -
Car06g02520 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 83 175 IPR018108 -
Car06g02520 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 273 357 IPR018108 -
Car06g02520 380 SUPERFAMILY Mitochondrial carrier 86 353 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02520 Car-Chr6 29395896 29401777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02520 5 375 Organic Solute Cotransporters AT3G51870 67.368 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02520 K14684 - gmx:100796878 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02520 06 29395896 29401777 Car03g01271 03 57175637 57179325 PCT