Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01271 ATGTCAACTTCCATTTCCTCCAAAGAGGACAGGACCCTAATCTCATGGCACCAAATTCCCCATCTCAAATGCGACGTCGTTTCGCCCAATTCCTATTCCCCTCTCCGTCAAAACGCCACACTCACTTTCTCCACAACCACCACTGGAGACACCAAATTCGCCTCTATCTCAGTGGCGGAAGCCAAACTTCAAAACCATTTCGCGCCAACGCCTTCTCAGCTCCTCAAACACCCGCTCGCTGCCTTGGCGTTCGTTCCTAGAGATGCCGCCCTCTTCACTGCTGGAGCAATTGCCGGCGCCGCCGCTAAGACATTCACGGCGCCACTTGACCGTATCAAGCTCCTCATGCAGACTCATGGTGTGCGGGTCGGGCAGGATAGTGCTAAGAAGGCTATAGGTTTCGTTGAGGCCATAACAGTTATAGGGAAGGAAGAAGGGATTAGAGGTTACTGGAAGGGAAACCTCCCTCAGGTGATTCGGGTTATACCTTATAGTGCCGTCCAGCTTTTTGCTTATGAAATTTATAAGAAATTATTCAGAGGACAGAATGGTGAGCTCTCTGTTGTGGGAAGACTTTCAGCCGGTGCTTTTGCTGGCATGACATCCACTTTTATAACTTACCCATTAGATGTCCTGAGATTAAGATTAGCTGTTGAACCTGGTTATCGGACGATGTCAGAGGTTGCCTTGTGCATGCTAAGGGAGGAAGGATTTGCATCTTTCTACAGAGGCCTTGGGCCTTCTCTTATCGCGATAGCTCCTTATATTGCAGTGAATTTTTGTGTTTTTGACTTATTAAAGAAGTCATTGCCTGAGAAGTATCAAAAGAGAACTGAAACATCTATACTCACCGCTGTGCTTTCGGCATCTCTAGCTACACTTACATGCTATCCTCTGGACACTGTCCGAAGACAAATGCAATTGAGGGGTACACCTTATACGACAGTATTAGAAGCTCTTTCAGGTATTGTGGCACGGGATGGAGTTGCCGGTTTGTATCGGGGATTTGTGCCCAATGCTCTGAAAACCCTACCAAACAGCAGCATCAAGCTTACCTCGTATGACATTGTGAAGCGCATAATTGCAGCTAGCGAGAAAGAATTTCAAACAATTGTAGATGAAAATCGCAACAAACAAAAGAACATCAACAATCAATGA 1158 0.4655 MSTSISSKEDRTLISWHQIPHLKCDVVSPNSYSPLRQNATLTFSTTTTGDTKFASISVAEAKLQNHFAPTPSQLLKHPLAALAFVPRDAALFTAGAIAGAAAKTFTAPLDRIKLLMQTHGVRVGQDSAKKAIGFVEAITVIGKEEGIRGYWKGNLPQVIRVIPYSAVQLFAYEIYKKLFRGQNGELSVVGRLSAGAFAGMTSTFITYPLDVLRLRLAVEPGYRTMSEVALCMLREEGFASFYRGLGPSLIAIAPYIAVNFCVFDLLKKSLPEKYQKRTETSILTAVLSASLATLTCYPLDTVRRQMQLRGTPYTTVLEALSGIVARDGVAGLYRGFVPNALKTLPNSSIKLTSYDIVKRIIAASEKEFQTIVDENRNKQKNINNQ 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01271 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 186 269 IPR018108 -
Car03g01271 385 Pfam Mitochondrial carrier protein 281 362 IPR018108 -
Car03g01271 385 Pfam Mitochondrial carrier protein 91 181 IPR018108 -
Car03g01271 385 Pfam Mitochondrial carrier protein 185 272 IPR018108 -
Car03g01271 385 PANTHER SOLUTE CARRIER FAMILY 25 10 374 - -
Car03g01271 385 Gene3D Mitochondrial carrier domain 89 361 IPR023395 -
Car03g01271 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 86 178 IPR018108 -
Car03g01271 385 PRINTS Mitochondrial carrier protein signature 91 104 IPR002067 GO:0055085
Car03g01271 385 PRINTS Mitochondrial carrier protein signature 104 118 IPR002067 GO:0055085
Car03g01271 385 PRINTS Mitochondrial carrier protein signature 153 173 IPR002067 GO:0055085
Car03g01271 385 PRINTS Mitochondrial carrier protein signature 201 219 IPR002067 GO:0055085
Car03g01271 385 PRINTS Mitochondrial carrier protein signature 242 260 IPR002067 GO:0055085
Car03g01271 385 PRINTS Mitochondrial carrier protein signature 285 307 IPR002067 GO:0055085
Car03g01271 385 SUPERFAMILY Mitochondrial carrier 90 356 IPR023395 -
Car03g01271 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 276 360 IPR018108 -
Car03g01271 385 PANTHER ADP/ATP CARRIER PROTEIN 10 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01271 Car-Chr3 57175637 57179325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01271 8 380 Organic Solute Cotransporters AT3G51870 67.460 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01271 K14684 - gmx:100778912 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01271 03 57175637 57179325 Car03g01271 03 57175637 57179325 ECH
Car06g02520 06 29395896 29401777 Car03g01271 03 57175637 57179325 PCT