Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02397 ATGGAGGAATGCAACAACAACAATAAAGGAGAAGTTCAGCCTTCATCAAGATCAATTCCACAACAACAATATTATTCTAGTTTCATACCAAGAAGAGAAAACAAAGGTAGTATTAATGCTTCATCATCATTGTTTTCTTGGTTTGGAAACAACCGGTTAGTTTTATGGCTACTTTTGATTACCCTTTGGGCTTATCTTGTTTTTTTTGTTCAATCAAAGTGGGATCATTATGATAAAGAACAAGAAATTTCTTCAAGGTTTGATTTTCATCACAACAATCATGATTTGGTTGTAAAAAATAGTTCTTTATTTGTTGATACAAAAATTGATGGAGTATTGTCCAAGAAACAAGAAAATGGTTCAAAGAAAAGGAGTAGAAGGTCTTTGAGAAGCAAACACAAGAGAAAAATCAAAGTTGAAAACTTTGCTATAGAAAAAAATGAGATAGAATTTGAAATTCCTCTTGTTGGTCCATTTGGGTCAATAGAAGACAAAATTTTGAAATTGGGTAGTAATGAAAATATTTGTGGAGTGTGCAACAAGAAAGGTGAATTTGCAAAAGTTGTTAAGTCAAAGAGCTTTGTGTTGATATTTCACGAGCTTTCTATGACTGGAGCACCACTTTCAATGATGGAATTGGCAAGTGAACTTTTGAGATGTGGTGCAAATGTTTCAGCTGTTGTTCTTAGTAAAAAAGGTGGTTTGATGGAAGAGCTTATTAGGAGAGAAATTAAGGTGGTTGATGATAAAGTTGATCATAGTTTCAAAAGTGGAATGATTGCTGATCTTGTCATTGCTGGATCAGCTGTTTGTGCTTCATGGATTGAACAATACATTGAACATTTTCCATCTGGTGCAAGTCAAGTAATTTGGTGGATTATGGAAAATCGAAGAGAGTACTTCGATAGATCGAAACACGTCTTGAACAGAGTGAAGATGCTGGTTTTTCTTTCCGAATCGCAATCGAAGCAATGGCGAAAATGGTGTGAAGAAGAAAGCATAAGACTTATATTCCACCCTGCAATTGTTCCATTGTCTGTCAATGATGAACTTGCTTTTGCAGCTGGAATGGATGTAAAAAGAAAGGTTTTGCGCGAATCGATTCGAAGAGAAATCGGGTTGAATGATAATGATATGCTTGTGATTTCACTAAGTAGCATTAATCCTGCTAAGGGTCAGTTATTGTTTCTTGAATCAGCAAGTTCATTAGTAGAAAATGAAACATTTCCAAAAGATGAGAAAATGAAAAAATCATTAGAAGATGGAAAAAATGAACATGTTTCTACTTTGATTAGAAGACATCATATTAGAAAATTGTTGCCAATGTTGAAGGATGGAAGTGTGGATTTCAACAATGTCTCAAGCAATTCTATAAGCAGTAACAGAAAGAAAGTGTTGTTAACCAACAACAATGGAAAAATGAAACAATCTCTCAAAATTCTCATTGGTTCTGTGAGATCTAAGAGTAACAAGGTGGAATATGTTAAAAGTCTTGTAAGTTTCTTGTCACAACATTCAAACTTGTCAAAGTCTGTTTTGTGGACTCCAGCTACAACACATGTTGCTTCAATTTACTCTGCTGCTGATGTTTATGTCATAAACTCTCAGGGATTGGGAGAAACCTTTGGACGTGTGACAATAGAAGCAATGGCATTTGGTCTTCCGGTGCTTGGAACAAATGCTGGAGGAACAAAGGAAATTGTGGAACATAATGTGACTGGTCTTCTTCATCCTATTGGACGTGGAGGGAATCATGTCCTTGCACAAAATCTTCGGTTTTTACTTGAAAACCAATTGGCAAGAGAGAAAATGGGGATGAATGGAAGAAACAAAGTGCAAAGAATGTACTTGAAGCAACACATGTATACTAAATTTGTAGATGTTCTTGTTAGGTGCATGACAAGCAAATAA 1911 0.3511 MEECNNNNKGEVQPSSRSIPQQQYYSSFIPRRENKGSINASSSLFSWFGNNRLVLWLLLITLWAYLVFFVQSKWDHYDKEQEISSRFDFHHNNHDLVVKNSSLFVDTKIDGVLSKKQENGSKKRSRRSLRSKHKRKIKVENFAIEKNEIEFEIPLVGPFGSIEDKILKLGSNENICGVCNKKGEFAKVVKSKSFVLIFHELSMTGAPLSMMELASELLRCGANVSAVVLSKKGGLMEELIRREIKVVDDKVDHSFKSGMIADLVIAGSAVCASWIEQYIEHFPSGASQVIWWIMENRREYFDRSKHVLNRVKMLVFLSESQSKQWRKWCEEESIRLIFHPAIVPLSVNDELAFAAGMDVKRKVLRESIRREIGLNDNDMLVISLSSINPAKGQLLFLESASSLVENETFPKDEKMKKSLEDGKNEHVSTLIRRHHIRKLLPMLKDGSVDFNNVSSNSISSNRKKVLLTNNNGKMKQSLKILIGSVRSKSNKVEYVKSLVSFLSQHSNLSKSVLWTPATTHVASIYSAADVYVINSQGLGETFGRVTIEAMAFGLPVLGTNAGGTKEIVEHNVTGLLHPIGRGGNHVLAQNLRFLLENQLAREKMGMNGRNKVQRMYLKQHMYTKFVDVLVRCMTSK 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02397 636 Pfam Glycosyl-transferase family 4 190 358 IPR041693 -
Car06g02397 636 CDD GT4_PimA-like 196 629 - -
Car06g02397 636 Gene3D Glycogen Phosphorylase B; 359 616 - -
Car06g02397 636 PANTHER BNAA05G14870D PROTEIN 16 636 - -
Car06g02397 636 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 200 629 - -
Car06g02397 636 Pfam Glycosyl transferases group 1 491 610 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02397 Car-Chr6 26368404 26372258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02397 15 633 Glycosyltransferase AT1G52420 52.135 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02397 - - cam:101493983 1208.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02397 06 26368404 26372258 Car06g02397 06 26368404 26372258 ECH
Car01g02802 01 53297613 53301728 Car06g02397 06 26368404 26372258 PCT